iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sha-106681

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01117484

Gene Name

RNF6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000011392.1	ENSSHAT00000013435.1	ENSSHAP00000013325.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.50e-06	26.5	635	676

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C +++   + ++ lpC H fh +C+ +w       s + +CP+Cr
   Q: 635  CSVCINEYvtGNKLRQLPCMHEFHIHCIDRW------LSENCTCPICR 676
           ********7744499****************......**********8 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MDQSRSSSGG GSEQASSQDH RHSEDERRWQ QERLSREEAY YQFINELNDE DYRLMRDHNL 60
LGTPGEITSE ELQQRLDGAK EHLASHPDLE NRQTEGGTLG DAEIPRDNSN GDSLLEWLNT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAGCCAGGA TATCACAGCA TGGATCAGTC TAGGTCTAGT TCAGGTGGAG GTAGTGAACA 60
GGCCTCTTCT CAAGACCACC GTCACAGTGA AGATGAGCGA AGATGGCAGC AAGAGCGCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0030424--C:axon
GO:0005737--C:cytoplasm
GO:0031965--C:nuclear membrane
GO:0016605--C:PML body
GO:0003677--F:DNA binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0030517--P:negative regulation of axon extension
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0044314--P:protein K27-linked ubiquitination
GO:0070936--P:protein K48-linked ubiquitination
GO:0085020--P:protein K6-linked ubiquitination
GO:0060765--P:regulation of androgen receptor signaling pathway
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

shr:100924472

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000396	Aegilops tauschii	40.51	3.00e-14	73.20
IUUC-Aml-001415	Ailuropoda melanoleuca	68.54	0.00e+00	766.00
IUUC-Atr-002738	Amborella trichopoda	34.94	1.00e-12	68.60
IUUC-Apl-003834	Anas platyrhynchos	65.60	0.00e+00	729.00
IUUC-Aca-004373	Anolis carolinensis	52.93	3.00e-159	555.00
IUUC-Aly-005870	Arabidopsis lyrata	41.41	9.00e-18	84.30
IUUC-Ath-006611	Arabidopsis thaliana	40.40	2.00e-17	83.20
IUUC-Ame-011730	Astyanax mexicanus	68.88	1.00e-97	350.00
IUUC-Bta-012763	Bos taurus	60.27	0.00e+00	667.00
IUUC-Bdi-015038	Brachypodium distachyon	53.85	2.00e-14	72.40
IUUC-Cja-018980	Callithrix jacchus	69.07	0.00e+00	801.00
IUUC-Cfa-020416	Canis familiaris	68.69	0.00e+00	785.00
IUUC-Cpo-022086	Cavia porcellus	60.12	0.00e+00	642.00
IUUC-Cre-022984	Chlamydomonas reinhardtii	33.33	1.00e-11	65.90
IUUC-Csa-023246	Chlorocebus sabaeus	69.81	0.00e+00	820.00
IUUC-Cho-024749	Choloepus hoffmanni	67.83	0.00e+00	652.00
IUUC-Dre-028428	Danio rerio	66.44	3.00e-96	346.00
IUUC-Dno-029617	Dasypus novemcinctus	69.57	0.00e+00	765.00
IUUC-Dor-030800	Dipodomys ordii	60.68	9.00e-87	314.00
IUUC-Ete-032882	Echinops telfairi	66.30	1.00e-120	427.00
IUUC-Eca-033892	Equus caballus	70.75	0.00e+00	843.00
IUUC-Eeu-034563	Erinaceus europaeus	73.73	2.00e-92	332.00
IUUC-Fca-035765	Felis catus	67.36	0.00e+00	742.00
IUUC-Fal-036981	Ficedula albicollis	63.30	0.00e+00	694.00
IUUC-Gmo-039344	Gadus morhua	65.85	3.00e-103	369.00
IUUC-Gga-041114	Gallus gallus	64.59	0.00e+00	673.00
IUUC-Gac-042220	Gasterosteus aculeatus	67.01	2.00e-106	379.00
IUUC-Ggo-044902	Gorilla gorilla	69.51	0.00e+00	828.00
IUUC-Hsa-046548	Homo sapiens	69.85	0.00e+00	830.00
IUUC-Hvu-047210	Hordeum vulgare	39.74	1.00e-14	74.30
IUUC-Itr-048447	Ictidomys tridecemlineatus	69.13	0.00e+00	823.00
IUUC-Lch-050541	Latimeria chalumnae	59.08	6.00e-112	398.00
IUUC-Lpe-051371	Leersia perrieri	53.85	1.00e-13	69.70
IUUC-Laf-054296	Loxodonta africana	67.36	0.00e+00	742.00
IUUC-Mcc-054858	Macaca mulatta	69.54	0.00e+00	824.00
IUUC-Meu-056296	Macropus eugenii	93.79	0.00e+00	773.00
IUUC-Mga-059307	Meleagris gallopavo	68.36	4.00e-123	435.00
IUUC-Mmr-060699	Microcebus murinus	69.57	0.00e+00	825.00
IUUC-Mdo-062162	Monodelphis domestica	93.13	0.00e+00	1113.00
IUUC-Mmu-064188	Mus musculus	60.24	0.00e+00	659.00
IUUC-Mpu-065891	Mustela putorius furo	67.80	0.00e+00	772.00
IUUC-Mlu-067177	Myotis lucifugus	66.52	0.00e+00	736.00
IUUC-Nle-069127	Nomascus leucogenys	69.51	0.00e+00	843.00
IUUC-Ont-072086	Oreochromis niloticus	66.33	2.00e-106	379.00
IUUC-Ocu-074281	Oryctolagus cuniculus	79.67	1.00e-52	198.00
IUUC-Obr-076577	Oryza brachyantha	39.74	7.00e-14	72.00
IUUC-Ogu-078922	Oryza glumaepatula	39.74	1.00e-14	74.30
IUUC-Oin-079430	Oryza indica	52.83	6.00e-14	70.90
IUUC-Olo-080739	Oryza longistaminata	52.94	8.00e-14	70.90
IUUC-Ome-081731	Oryza meridionalis	40.26	2.00e-14	74.70
IUUC-Oni-082313	Oryza nivara	39.74	1.00e-14	73.90
IUUC-Opu-083606	Oryza punctata	38.89	1.00e-13	70.90
IUUC-Oru-085061	Oryza rufipogon	52.83	7.00e-14	70.50
IUUC-Ola-087452	Oryzias latipes	65.41	2.00e-104	373.00
IUUC-Oga-088750	Otolemur garnettii	69.38	0.00e+00	808.00
IUUC-Oar-089523	Ovis aries	59.82	0.00e+00	641.00
IUUC-Ptr-091533	Pan troglodytes	69.85	0.00e+00	830.00
IUUC-Pan-092675	Papio anubis	69.11	0.00e+00	810.00
IUUC-Psi-093735	Pelodiscus sinensis	65.68	0.00e+00	763.00
IUUC-Ppa-095697	Physcomitrella patens	35.24	4.00e-15	76.60
IUUC-Pfo-096637	Poecilia formosa	65.55	3.00e-106	379.00
IUUC-Pab-098486	Pongo abelii	69.96	0.00e+00	849.00
IUUC-Pop-098897	Populus trichocarpa	37.96	6.00e-15	75.10
IUUC-Pca-100143	Procavia capensis	67.05	1.00e-132	467.00
IUUC-Ppe-101581	Prunus persica	38.75	1.00e-13	72.00
IUUC-Pva-103151	Pteropus vampyrus	64.70	0.00e+00	729.00
IUUC-Rno-105745	Rattus norvegicus	59.91	3.00e-180	624.00
IUUC-Sit-110544	Setaria italica	37.18	9.00e-14	71.20
IUUC-Sar-113229	Sorex araneus	74.75	3.00e-113	402.00
IUUC-Sbi-113958	Sorghum bicolor	53.85	2.00e-14	72.40
IUUC-Ssc-115345	Sus scrofa	48.30	1.00e-57	217.00
IUUC-Tgu-117477	Taeniopygia guttata	61.72	0.00e+00	655.00
IUUC-Tru-118302	Takifugu rubripes	64.33	3.00e-105	375.00
IUUC-Tsy-119338	Tarsius syrichta	55.18	1.00e-164	573.00
IUUC-Tni-119675	Tetraodon nigroviridis	61.20	2.00e-91	329.00
IUUC-Tca-120922	Theobroma cacao	41.03	1.00e-14	73.90
IUUC-Tae-125479	Triticum aestivum	55.77	1.00e-14	73.20
IUUC-Tur-125977	Triticum urartu	56.82	3.00e-14	72.00
IUUC-Tbe-127505	Tupaia belangeri	66.67	1.00e-72	267.00
IUUC-Ttr-128367	Tursiops truncatus	64.19	6.00e-179	620.00
IUUC-Vpa-130480	Vicugna pacos	72.56	1.00e-118	419.00
IUUC-Vvi-130869	Vitis vinifera	39.02	4.00e-14	70.90
IUUC-Xma-133863	Xiphophorus maculatus	66.22	2.00e-107	383.00
IUUC-Yli-134656	Yarrowia lipolytica	45.45	1.00e-09	58.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence