iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sit-110460

Ensembl Protein ID

Si004844m

UniProt Accession

K3XSE5; K3XSE5_SETIT

Genbank Protein ID

KQL03244.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM003532

Gene Name

LOC101785277; SETIT_004844mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Si004844m.g	Si004844m	Si004844m

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.40e-23	81.0	207	244

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrtgvllk 37
           H d v+cl +     +ll +Gs+D+t+k W l +g+++ 
   Q: 207  HRDTVSCLVLhavA-GLLYTGSHDHTVKAWKLADGTCVD 244
           99*****9888532.8********************986 PP

Organism

Setaria italica

Protein Sequence
(Fasta)

MDFGRRKSFS FFEEDRKSAR PAGAHTPVHQ YYARAARSPV REAAEPARLS MSSVPGVAAE 60
PPFASGGGGG CSPWVQSPLH GRLRFPPSPA AIYHCLAALH RLEGDVHALA VARGVLFTAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATTTCG GCCGCCGCAA GAGCTTCAGC TTCTTCGAGG AGGACCGCAA GTCGGCGCGC 60
CCGGCGGGCG CGCACACGCC CGTGCACCAG TACTACGCGC GCGCCGCCCG TTCGCCGGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001063	Aegilops tauschii	82.65	9.00e-160	555.00
IUUC-Atr-002893	Amborella trichopoda	44.72	9.00e-70	256.00
IUUC-Bdi-014017	Brachypodium distachyon	83.18	0.00e+00	651.00
IUUC-Gma-044257	Glycine max	45.21	3.00e-96	344.00
IUUC-Hvu-047512	Hordeum vulgare	83.20	4.00e-89	320.00
IUUC-Lpe-051634	Leersia perrieri	74.01	4.00e-180	623.00
IUUC-Mtr-058235	Medicago truncatula	42.92	3.00e-94	339.00
IUUC-Mac-064451	Musa acuminata	55.46	5.00e-103	367.00
IUUC-Ogl-077347	Oryza glaberrima	75.37	0.00e+00	681.00
IUUC-Ogu-079043	Oryza glumaepatula	75.37	0.00e+00	681.00
IUUC-Oin-079372	Oryza indica	75.42	0.00e+00	673.00
IUUC-Ome-081348	Oryza meridionalis	74.31	0.00e+00	668.00
IUUC-Oni-082993	Oryza nivara	75.37	0.00e+00	681.00
IUUC-Opu-083517	Oryza punctata	67.37	8.00e-148	516.00
IUUC-Oru-085049	Oryza rufipogon	75.56	0.00e+00	681.00
IUUC-Osa-085538	Oryza sativa	75.37	0.00e+00	677.00
IUUC-Pop-100024	Populus trichocarpa	50.14	2.00e-101	361.00
IUUC-Ppe-101634	Prunus persica	46.70	1.00e-93	335.00
IUUC-Stu-112837	Solanum tuberosum	40.24	3.00e-101	361.00
IUUC-Sbi-113780	Sorghum bicolor	79.22	0.00e+00	698.00
IUUC-Tca-121243	Theobroma cacao	42.23	4.00e-106	377.00
IUUC-Tae-123954	Triticum aestivum	83.04	0.00e+00	701.00
IUUC-Vvi-131707	Vitis vinifera	43.67	1.00e-99	355.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence