iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114743

UUCD1 version

UUC-SoB-01588

Ensembl Protein ID

Sb03g031060.1

UniProt Accession

A0A1B6Q5C3; A0A1B6Q5C3_SORBI

Genbank Protein ID

KXG33110.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G255700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g031060	Sb03g031060.1	Sb03g031060.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	1.40e-30	106.6	238	377

Active Site

Position(s)	Description	Evidence
298	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltk..ifhPnvyenGkvClsilk.....ee 89
           R+++e k lekd pe+i +++ ++  ++ ++++i+Gp++tpY++g+F ++++fp++YP+kPP v++ +   +++Pn+ye GkvCls+l+       
   Q: 238  RIQHEWKVLEKDLPETIYVRVYED-RMDLLRAVIVGPAGTPYHDGLFFFDVYFPSRYPSKPPLVNYRSGglRLNPNLYECGKVCLSLLNtwsgtGC 332
           89**********************.5******************************************999*****************87878789 PP
   S: 90   ekWsp.alsvesvllsiqsll..aepnpesplneeaaellkknre 131
           e W+p  +++ +vl+siq+l+  ++p++++p ++  a++ + +++
   Q: 333  EMWNPsNSTMLQVLVSIQALVlnSKPYFNEPGYAMHANTSQGEKQ 377
           *****7789***********98888*******9999976655544 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAEGSSRGYP SGSGDGWRLV LHDPDVVEVS AETAVEWSSS RSRRKKLKLP QSAVVYCPFG 60
CCSDYYEEFL VVVVIPSDII ELDDDDPDGV MIIGEKISNQ KNEQEVVHMD WPEHTTELQS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGAGG GCTCTTCCAG GTGAGCGCGC CGGCCTCCTG CGATCCTTTC GCGCGCCGTT 60
TCGCGCCTTT GTGGGGGGTG GTTTGGGGGC GAGTTTTGAA TGTCTCACGC GTGTTTTGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000608--UBQ-conjugat_E2
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003108	Amborella trichopoda	55.70	8.00e-97	346.00
IUUC-Cho-024890	Choloepus hoffmanni	46.71	7.00e-30	127.00
IUUC-Laf-054034	Loxodonta africana	46.15	3.00e-35	145.00
IUUC-Mdo-062990	Monodelphis domestica	46.15	4.00e-35	145.00
IUUC-Opr-070799	Ochotona princeps	46.15	4.00e-35	145.00
IUUC-Oba-075870	Oryza barthii	61.40	2.00e-161	561.00
IUUC-Ogl-077412	Oryza glaberrima	61.16	3.00e-158	550.00
IUUC-Ogu-077966	Oryza glumaepatula	61.40	2.00e-160	557.00
IUUC-Oin-080009	Oryza indica	61.36	1.00e-158	551.00
IUUC-Oni-082326	Oryza nivara	61.60	2.00e-161	561.00
IUUC-Opu-083246	Oryza punctata	70.72	6.00e-147	512.00
IUUC-Oru-085077	Oryza rufipogon	61.60	9.00e-162	561.00
IUUC-Osa-086014	Oryza sativa	61.36	2.00e-158	551.00
IUUC-Sha-107483	Sarcophilus harrisii	46.15	4.00e-35	145.00
IUUC-Sit-110273	Setaria italica	65.91	3.00e-145	507.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence