iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058688

Ensembl Protein ID

KEH42377

UniProt Accession

G7ZZK5; G7ZZK5_MEDTR

Genbank Protein ID

KEH42377.1

Protein Name

PHD zinc finger protein

Genbank Nucleotide ID

CM001217

Gene Name

MTR_1g068930

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_1g068930	KEH42376	KEH42376
MTR_1g068930	KEH42377	KEH42377

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	6.10e-12	47.0	555	597

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           ++C+vCg+gg+    l+ C+ C ++fH+aCl+l    ++p+s  w C +C+
   Q: 555  DMCAVCGDGGD----LILCNGCPRAFHAACLGLH---SVPESG-WHCLNCE 597
           79*********....*******************...*****8.******7 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MGEEAVCVQE LVDGKTENTD ESRLELKRDY NQCVADTEAN VPPNKKQAKE VSNDELRSEV 60
TNPNVSATEH AQTFHDISSQ PTESENVSHA ECGELTSTGL ENSSSHDTVS DEAGVRNNDS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCGAAG AAGCGGTTTG TGTGCAAGAA TTGGTAGATG GAAAGACGGA AAATACGGAT 60
GAATCAAGGT TGGAATTGAA ACGTGATTAT AACCAATGTG TTGCTGATAC TGAAGCAAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR016181--Acyl_CoA_acyltransferase
IPR000182--GNAT_dom
IPR032308--Jas
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51186--GNAT
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF16135--Jas
PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0008080--F:N-acetyltransferase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006555	Arabidopsis lyrata	53.33	0.00e+00	872.00
IUUC-Ath-007521	Arabidopsis thaliana	54.65	0.00e+00	879.00
IUUC-Bol-016318	Brassica oleracea	62.69	0.00e+00	788.00
IUUC-Bra-017162	Brassica rapa	62.90	0.00e+00	789.00
IUUC-Gma-043820	Glycine max	80.51	0.00e+00	1400.00
IUUC-Hvu-047802	Hordeum vulgare	38.71	5.00e-130	457.00
IUUC-Lpe-050827	Leersia perrieri	42.54	1.00e-151	530.00
IUUC-Meu-056050	Macropus eugenii	31.01	2.00e-13	72.00
IUUC-Mac-064830	Musa acuminata	44.92	5.00e-161	560.00
IUUC-Oba-075837	Oryza barthii	38.81	8.00e-130	457.00
IUUC-Obr-076448	Oryza brachyantha	38.14	2.00e-129	456.00
IUUC-Ogu-078244	Oryza glumaepatula	38.44	2.00e-128	452.00
IUUC-Oin-079045	Oryza indica	44.42	3.00e-97	349.00
IUUC-Olo-080735	Oryza longistaminata	43.50	3.00e-93	336.00
IUUC-Ome-081425	Oryza meridionalis	37.70	1.00e-125	444.00
IUUC-Oni-082279	Oryza nivara	38.81	7.00e-130	457.00
IUUC-Opu-083459	Oryza punctata	44.56	6.00e-114	404.00
IUUC-Oru-085169	Oryza rufipogon	38.44	2.00e-128	452.00
IUUC-Osa-085819	Oryza sativa	38.68	2.00e-128	453.00
IUUC-Pop-099875	Populus trichocarpa	52.41	4.00e-142	497.00
IUUC-Ppe-102014	Prunus persica	61.58	0.00e+00	1046.00
IUUC-Sha-107333	Sarcophilus harrisii	30.15	3.00e-12	65.90
IUUC-Sit-109839	Setaria italica	45.97	8.00e-116	410.00
IUUC-Sly-110901	Solanum lycopersicum	55.77	0.00e+00	918.00
IUUC-Stu-112535	Solanum tuberosum	68.76	0.00e+00	678.00
IUUC-Tca-121723	Theobroma cacao	59.29	0.00e+00	926.00
IUUC-Tae-124767	Triticum aestivum	39.45	1.00e-144	507.00
IUUC-Tur-126190	Triticum urartu	38.03	4.00e-127	448.00
IUUC-Vvi-131745	Vitis vinifera	58.11	0.00e+00	979.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence