iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131086

Ensembl Protein ID

VIT_08s0007g00730.t01

UniProt Accession

D7THK7; D7THK7_VITVI

Genbank Protein ID

CBI30523.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595991

Gene Name

VIT_08s0007g00730

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_08s0007g00730	VIT_08s0007g00730.t01	VIT_08s0007g00730.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.70e-27	94.2	555	586
UBD/Beta-Prp	1.30e-47	163.0	146	304

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH d+vt+l+f  d + l+++s Dgt+++WD+
   Q: 555  GHIDRVTDLCFsEDgKWLLTSSMDGTLRIWDV 586
           8**********955699**************6 PP

UBD/Beta-Prp

   S: 103  sp..sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsf 188
           +p  + +k++ Gs+   +++w+++t+q+l+  ++g +++++c v++p  ++++ G++D+t+ + +++ ++ + t++    ++v+ lsf
   Q: 146  HPdtYLNKVILGSEEGSLQLWNISTKQKLY-EFKGWKSSICCCVSSPALDVVAVGCADGTIHIHNIRYDEEIVTFSHSTRGAVTALSF 232
           55335599**********************.9***************88**************************9999********* PP
   S: 189  dsng.kelvsgsldgtvklwdlqtgec.vrtlnghtdnvksvrfspnderlvsgssDgsiriW..dlrsgdl 256
           + +g + ++sg+  g + +w+l++ +   ++ ++h++ + s++f+ n+  l+s s+D+si++W  d+  gd+
   Q: 233  STDGrPLVASGGSSGVISIWNLEKRRLqSVIREAHDSSIISLHFFANEPVLMSSSADNSIKMWifDTSDGDP 304
           9999778889************977762455677*****************************888877765 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MGIFEPFRAI GYITSTVPFS VQRLGTETFV TVSVGKAWQI YNCAKLNLVL VGPQLPKKIR 60
ALASYRDYTF AAYGNDIAVF KRAHQVATWS RHNAKVNLLL LFGEQILSID VGGNMFMWAF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGGAGAGAA CCGTCTCCTT CCCTCTCTCT GCCAAGTTCA AAAGAGAACC CAAAAAAGAA 60
ATGGGAATTT TCGAACCCTT TAGAGCAATA GGATACATCA CAAGCACGGT TCCTTTCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR007319--SSU_processome_Utp21
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF04192--Utp21
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0006364--P:rRNA processing

KEGG

vvi:100266615

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001096	Aegilops tauschii	70.95	0.00e+00	1281.00
IUUC-Aml-002289	Ailuropoda melanoleuca	34.90	6.00e-147	514.00
IUUC-Atr-002859	Amborella trichopoda	71.91	0.00e+00	1229.00
IUUC-Apl-003505	Anas platyrhynchos	37.13	7.00e-138	483.00
IUUC-Aca-004339	Anolis carolinensis	34.39	5.00e-145	507.00
IUUC-Aly-005913	Arabidopsis lyrata	75.85	0.00e+00	1379.00
IUUC-Ath-006767	Arabidopsis thaliana	74.89	0.00e+00	1371.00
IUUC-Ago-007763	Ashbya gossypii	30.79	2.00e-111	396.00
IUUC-Acl-008275	Aspergillus clavatus	31.42	4.00e-80	291.00
IUUC-Afl-008457	Aspergillus flavus	29.95	3.00e-75	275.00
IUUC-Afu-008914	Aspergillus fumigatus	29.94	1.00e-87	317.00
IUUC-Ani-009225	Aspergillus nidulans	30.98	1.00e-90	327.00
IUUC-Aor-010046	Aspergillus oryzae	29.24	1.00e-100	360.00
IUUC-Ate-010337	Aspergillus terreus	28.99	3.00e-98	352.00
IUUC-Ame-010963	Astyanax mexicanus	36.86	6.00e-150	523.00
IUUC-Bgr-011973	Blumeria graminis	28.50	8.00e-99	354.00
IUUC-Bta-012462	Bos taurus	35.04	8.00e-149	520.00
IUUC-Bci-013940	Botrytis cinerea	30.28	2.00e-115	409.00
IUUC-Bdi-014725	Brachypodium distachyon	72.14	0.00e+00	1328.00
IUUC-Bol-016534	Brassica oleracea	76.18	0.00e+00	1390.00
IUUC-Bra-016781	Brassica rapa	73.98	0.00e+00	1345.00
IUUC-Cel-018581	Caenorhabditis elegans	27.98	1.00e-82	300.00
IUUC-Cja-019675	Callithrix jacchus	33.84	2.00e-152	531.00
IUUC-Cfa-020118	Canis familiaris	35.08	1.00e-147	516.00
IUUC-Cpo-021798	Cavia porcellus	34.69	1.00e-146	513.00
IUUC-Cre-022566	Chlamydomonas reinhardtii	33.51	9.00e-50	190.00
IUUC-Csa-023547	Chlorocebus sabaeus	34.31	7.00e-144	503.00
IUUC-Cho-024518	Choloepus hoffmanni	29.87	1.00e-93	336.00
IUUC-Cin-025339	Ciona intestinalis	32.58	3.00e-143	501.00
IUUC-Cgl-026476	Colletotrichum gloeosporioides	29.15	6.00e-102	364.00
IUUC-Cne-026859	Cryptococcus neoformans	33.49	1.00e-136	479.00
IUUC-Cme-027173	Cyanidioschyzon merolae	27.06	9.00e-83	300.00
IUUC-Dre-027733	Danio rerio	35.01	5.00e-147	514.00
IUUC-Dno-029439	Dasypus novemcinctus	34.83	3.00e-142	498.00
IUUC-Dor-030329	Dipodomys ordii	33.12	1.00e-63	237.00
IUUC-Dse-031511	Dothistroma septosporum	28.23	2.00e-90	326.00
IUUC-Dme-031694	Drosophila melanogaster	32.43	3.00e-129	455.00
IUUC-Ete-032930	Echinops telfairi	35.03	6.00e-124	437.00
IUUC-Eca-033302	Equus caballus	34.78	1.00e-145	509.00
IUUC-Eeu-034516	Erinaceus europaeus	34.72	2.00e-156	545.00
IUUC-Fca-036064	Felis catus	34.86	6.00e-146	510.00
IUUC-Fal-037024	Ficedula albicollis	35.19	4.00e-152	531.00
IUUC-Fox-037787	Fusarium oxysporum	29.33	4.00e-94	338.00
IUUC-Fso-038378	Fusarium solani	29.43	5.00e-97	348.00
IUUC-Gmo-039637	Gadus morhua	35.40	7.00e-80	290.00
IUUC-Ggr-040108	Gaeumannomyces graminis	29.62	5.00e-96	345.00
IUUC-Gga-040982	Gallus gallus	35.19	5.00e-159	554.00
IUUC-Gac-041565	Gasterosteus aculeatus	36.14	6.00e-140	490.00
IUUC-Gma-043414	Glycine max	78.01	0.00e+00	1441.00
IUUC-Ggo-045463	Gorilla gorilla	34.13	4.00e-145	508.00
IUUC-Hsa-045675	Homo sapiens	34.10	1.00e-146	513.00
IUUC-Hvu-047352	Hordeum vulgare	70.69	0.00e+00	1182.00
IUUC-Itr-048088	Ictidomys tridecemlineatus	34.24	3.00e-154	538.00
IUUC-Kpa-049164	Komagataella pastoris	31.18	1.00e-109	389.00
IUUC-Lch-050476	Latimeria chalumnae	34.79	5.00e-155	540.00
IUUC-Lpe-051556	Leersia perrieri	60.90	0.00e+00	1033.00
IUUC-Loc-052820	Lepisosteus oculatus	35.88	2.00e-152	532.00
IUUC-Lma-052961	Leptosphaeria maculans	29.70	2.00e-95	343.00
IUUC-Laf-054006	Loxodonta africana	33.73	4.00e-137	481.00
IUUC-Mcc-055037	Macaca mulatta	33.99	8.00e-146	510.00
IUUC-Mor-057280	Magnaporthe oryzae	29.95	1.00e-98	354.00
IUUC-Mpo-057408	Magnaporthe poae	29.20	8.00e-94	337.00
IUUC-Mtr-058473	Medicago truncatula	77.56	0.00e+00	1447.00
IUUC-Mla-058892	Melampsora laricipopulina	33.90	2.00e-113	402.00
IUUC-Mga-059598	Meleagris gallopavo	30.92	9.00e-112	397.00
IUUC-Mvi-060334	Microbotryum violaceum	31.26	4.00e-106	378.00
IUUC-Mmr-061239	Microcebus murinus	34.10	1.00e-144	506.00
IUUC-Mdo-062471	Monodelphis domestica	34.96	1.00e-144	506.00
IUUC-Mmu-063872	Mus musculus	35.56	3.00e-156	545.00
IUUC-Mac-064631	Musa acuminata	75.39	0.00e+00	1249.00
IUUC-Mpu-066039	Mustela putorius furo	35.19	3.00e-157	548.00
IUUC-Mlu-067485	Myotis lucifugus	34.46	9.00e-144	503.00
IUUC-Nfi-068319	Neosartorya fischeri	30.35	7.00e-100	357.00
IUUC-Ncr-068725	Neurospora crassa	29.87	4.00e-103	369.00
IUUC-Nle-069050	Nomascus leucogenys	34.46	1.00e-147	516.00
IUUC-Opr-070437	Ochotona princeps	37.80	3.00e-43	169.00
IUUC-Ont-071574	Oreochromis niloticus	35.89	2.00e-147	515.00
IUUC-Oan-072826	Ornithorhynchus anatinus	36.91	8.00e-161	560.00
IUUC-Ocu-073995	Oryctolagus cuniculus	35.57	8.00e-141	493.00
IUUC-Oba-075407	Oryza barthii	65.97	0.00e+00	1157.00
IUUC-Obr-076451	Oryza brachyantha	73.27	0.00e+00	1379.00
IUUC-Ogl-077535	Oryza glaberrima	73.06	0.00e+00	1341.00
IUUC-Ogu-077995	Oryza glumaepatula	65.11	0.00e+00	1156.00
IUUC-Oin-079431	Oryza indica	73.46	0.00e+00	1349.00
IUUC-Olo-080495	Oryza longistaminata	64.92	0.00e+00	1135.00
IUUC-Oni-082336	Oryza nivara	70.93	0.00e+00	1268.00
IUUC-Opu-084028	Oryza punctata	64.27	0.00e+00	1060.00
IUUC-Oru-084500	Oryza rufipogon	65.08	0.00e+00	1153.00
IUUC-Osa-086242	Oryza sativa	73.57	0.00e+00	1351.00
IUUC-Ola-086612	Oryzias latipes	34.13	2.00e-113	402.00
IUUC-Olu-087703	Ostreococcus lucimarinus	35.55	6.00e-156	543.00
IUUC-Oga-088572	Otolemur garnettii	34.83	2.00e-147	515.00
IUUC-Oar-090363	Ovis aries	35.41	7.00e-151	527.00
IUUC-Ptr-090477	Pan troglodytes	34.10	6.00e-145	507.00
IUUC-Pan-092914	Papio anubis	33.99	1.00e-146	513.00
IUUC-Psi-093019	Pelodiscus sinensis	34.50	3.00e-143	501.00
IUUC-Pma-094303	Petromyzon marinus	33.94	1.00e-122	432.00
IUUC-Pno-094938	Phaeosphaeria nodorum	29.03	1.00e-84	307.00
IUUC-Ppa-095720	Physcomitrella patens	55.56	0.00e+00	1023.00
IUUC-Pfo-097034	Poecilia formosa	34.76	5.00e-135	474.00
IUUC-Pab-097669	Pongo abelii	34.14	4.00e-147	514.00
IUUC-Pop-098835	Populus trichocarpa	79.23	0.00e+00	1460.00
IUUC-Pca-101097	Procavia capensis	37.05	4.00e-58	219.00
IUUC-Ppe-101430	Prunus persica	82.38	0.00e+00	1524.00
IUUC-Pva-103152	Pteropus vampyrus	34.97	2.00e-149	522.00
IUUC-Pgr-103517	Puccinia graminis	30.25	2.00e-128	452.00
IUUC-Ptt-103697	Puccinia triticina	30.92	4.00e-95	342.00
IUUC-Pte-104121	Pyrenophora teres	28.03	3.00e-91	329.00
IUUC-Pyt-104672	Pyrenophora triticirepentis	27.83	1.00e-90	327.00
IUUC-Rno-105435	Rattus norvegicus	34.90	7.00e-151	527.00
IUUC-Sce-106202	Saccharomyces cerevisiae	31.13	1.00e-99	357.00
IUUC-Sha-107272	Sarcophilus harrisii	36.36	4.00e-142	498.00
IUUC-Sja-107744	Schizosaccharomyces japonicus	36.54	1.00e-155	543.00
IUUC-Spo-108256	Schizosaccharomyces pombe	35.86	5.00e-153	534.00
IUUC-Ssl-108618	Sclerotinia sclerotiorum	29.67	1.00e-108	387.00
IUUC-Smo-108762	Selaginella moellendorffii	55.90	0.00e+00	1018.00
IUUC-Sit-110051	Setaria italica	72.62	0.00e+00	1359.00
IUUC-Sly-111181	Solanum lycopersicum	78.83	0.00e+00	1434.00
IUUC-Stu-112018	Solanum tuberosum	78.83	0.00e+00	1432.00
IUUC-Sar-113348	Sorex araneus	33.24	4.00e-99	355.00
IUUC-Sbi-114282	Sorghum bicolor	71.63	0.00e+00	1361.00
IUUC-Sre-114946	Sporisorium reilianum	30.18	8.00e-85	308.00
IUUC-Ssc-115287	Sus scrofa	35.15	3.00e-149	521.00
IUUC-Tgu-117138	Taeniopygia guttata	33.49	6.00e-122	431.00
IUUC-Tru-118232	Takifugu rubripes	35.53	3.00e-139	488.00
IUUC-Tsy-119502	Tarsius syrichta	27.99	6.00e-99	354.00
IUUC-Tni-120378	Tetraodon nigroviridis	37.23	8.00e-140	490.00
IUUC-Tca-121506	Theobroma cacao	81.50	0.00e+00	1488.00
IUUC-Tre-122166	Trichoderma reesei	28.64	1.00e-104	373.00
IUUC-Tvi-122385	Trichoderma virens	29.27	9.00e-103	367.00
IUUC-Tae-122836	Triticum aestivum	71.43	0.00e+00	1364.00
IUUC-Tur-126490	Triticum urartu	62.72	0.00e+00	1068.00
IUUC-Tme-127157	Tuber melanosporum	31.11	2.00e-113	402.00
IUUC-Tbe-127981	Tupaia belangeri	37.43	4.00e-129	454.00
IUUC-Ttr-128886	Tursiops truncatus	34.13	1.00e-144	506.00
IUUC-Uma-129439	Ustilago maydis	29.79	2.00e-90	326.00
IUUC-Vda-129760	Verticillium dahliae	29.44	3.00e-105	375.00
IUUC-Vpa-130456	Vicugna pacos	34.53	5.00e-147	514.00
IUUC-Xtr-131829	Xenopus tropicalis	36.21	5.00e-164	570.00
IUUC-Xma-133588	Xiphophorus maculatus	34.61	5.00e-132	464.00
IUUC-Yli-134328	Yarrowia lipolytica	30.65	4.00e-103	368.00
IUUC-Zma-135808	Zea mays	70.86	0.00e+00	1352.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence