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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Cel-018451
Ensembl Protein ID F30F8.8.1
UniProt Accession G5EF68; G5EF68_CAEEL
Genbank Protein ID CAB03035.2
Protein Name TAF (TBP-associated transcription factor) family
Genbank Nucleotide ID BX284601
Gene Name taf-5; CELE_F30F8.8; F30F8.8
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
WBGene00006386 F30F8.8.1 F30F8.8.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNAmiRNAMapRAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 6.00e-21 74.0 392 427
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH ++v++++f +d +ll+s+++D t+++W++ t++
   Q: 392  GHGGPVFSVNFsPDrRLLISSAGDRTVRLWSMETQR 427
           8*************9****************98875 PP
   
Organism Caenorhabditis elegans
Protein Sequence
(Fasta)
MDSENSSSHS ISSPQMFQNT HNNSAMEDNL LSRPMNNESL QMIIGYLRRN GLTETEELLT 60
REAGPVLRVE GSNGLPPEEA ISVEFDTFVQ HANDCTDVVQ AEFSQLLFPI FAHSYIALIE 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Cel-018451|E3,WD_repeat|Caenorhabditis elegans
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GCGTCTCGCT TGGGCTTCAA CTGCTTCTCG GCGTCCCTCT GAATTTTATA TGCATTCGAC 60
AACGTTTGTG TGTGTGTGAA ATCGTCATTC TAGGACAACA ATTCGTATTT TCGTTGCATT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Cel-018451|E3,WD_repeat|Caenorhabditis elegans
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR007582--TFIID_NTD2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF04494--TFIID_NTD2
PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00667--LisH
SM00320--WD40
Gene Ontology

GO:0005634--C:nucleus
KEGG cel:CELE_F30F8.8
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000851 Aegilops tauschii 35.93 1.00e-39 156.00
IUUC-Aml-001607 Ailuropoda melanoleuca 33.45 1.00e-86 313.00
IUUC-Atr-003136 Amborella trichopoda 26.57 2.00e-59 222.00
IUUC-Apl-004193 Anas platyrhynchos 33.05 9.00e-84 303.00
IUUC-Aca-004522 Anolis carolinensis 32.44 1.00e-85 309.00
IUUC-Aly-006476 Arabidopsis lyrata 28.57 2.00e-58 219.00
IUUC-Ath-006587 Arabidopsis thaliana 28.31 1.00e-58 220.00
IUUC-Ago-007736 Ashbya gossypii 30.92 3.00e-57 215.00
IUUC-Acl-008092 Aspergillus clavatus 27.11 3.00e-55 208.00
IUUC-Afl-008659 Aspergillus flavus 26.96 6.00e-56 211.00
IUUC-Afu-008902 Aspergillus fumigatus 26.83 2.00e-53 202.00
IUUC-Ani-009462 Aspergillus nidulans 26.17 1.00e-43 170.00
IUUC-Aor-010083 Aspergillus oryzae 26.96 6.00e-56 211.00
IUUC-Ate-010271 Aspergillus terreus 26.72 6.00e-53 201.00
IUUC-Ame-010721 Astyanax mexicanus 33.05 3.00e-89 322.00
IUUC-Bgr-012257 Blumeria graminis 24.11 3.00e-41 162.00
IUUC-Bta-013539 Bos taurus 33.16 1.00e-86 313.00
IUUC-Bci-013737 Botrytis cinerea 24.24 4.00e-46 178.00
IUUC-Bdi-015041 Brachypodium distachyon 28.33 1.00e-49 190.00
IUUC-Bol-016198 Brassica oleracea 26.72 9.00e-61 226.00
IUUC-Bra-017660 Brassica rapa 28.05 6.00e-60 224.00
IUUC-Cja-018881 Callithrix jacchus 33.45 7.00e-87 313.00
IUUC-Cfa-020056 Canis familiaris 33.45 1.00e-86 313.00
IUUC-Cpo-021454 Cavia porcellus 33.97 1.00e-89 323.00
IUUC-Cre-022736 Chlamydomonas reinhardtii 30.38 1.00e-31 129.00
IUUC-Csa-023045 Chlorocebus sabaeus 33.45 7.00e-87 313.00
IUUC-Cho-024284 Choloepus hoffmanni 42.07 3.00e-54 205.00
IUUC-Cin-025457 Ciona intestinalis 38.15 1.00e-51 195.00
IUUC-Csv-025882 Ciona savignyi 34.61 7.00e-63 233.00
IUUC-Cgl-026392 Colletotrichum gloeosporioides 22.42 3.00e-44 172.00
IUUC-Cne-026876 Cryptococcus neoformans 25.93 1.00e-43 170.00
IUUC-Cme-027302 Cyanidioschyzon merolae 35.85 1.00e-54 206.00
IUUC-Dre-027980 Danio rerio 34.86 2.00e-91 329.00
IUUC-Dno-028863 Dasypus novemcinctus 33.28 4.00e-87 314.00
IUUC-Dor-030561 Dipodomys ordii 33.45 8.00e-87 313.00
IUUC-Dse-031547 Dothistroma septosporum 24.05 7.00e-50 191.00
IUUC-Dme-031917 Drosophila melanogaster 29.54 2.00e-75 275.00
IUUC-Ete-032319 Echinops telfairi 25.57 8.00e-48 184.00
IUUC-Eca-033927 Equus caballus 33.28 4.00e-88 317.00
IUUC-Eeu-034449 Erinaceus europaeus 33.69 2.00e-70 259.00
IUUC-Fca-036325 Felis catus 33.45 1.00e-86 313.00
IUUC-Fal-036604 Ficedula albicollis 33.00 2.00e-84 305.00
IUUC-Fox-038049 Fusarium oxysporum 22.93 3.00e-31 129.00
IUUC-Fso-038302 Fusarium solani 22.72 1.00e-35 143.00
IUUC-Gmo-038832 Gadus morhua 30.65 9.00e-81 293.00
IUUC-Ggr-039878 Gaeumannomyces graminis 24.96 8.00e-44 171.00
IUUC-Gga-041147 Gallus gallus 33.39 6.00e-87 313.00
IUUC-Gac-041373 Gasterosteus aculeatus 32.82 1.00e-86 312.00
IUUC-Gma-043230 Glycine max 28.43 3.00e-65 241.00
IUUC-Ggo-044568 Gorilla gorilla 30.21 5.00e-44 171.00
IUUC-Hsa-045971 Homo sapiens 33.45 7.00e-87 313.00
IUUC-Hvu-047695 Hordeum vulgare 34.51 8.00e-48 183.00
IUUC-Itr-048400 Ictidomys tridecemlineatus 33.45 4.00e-87 314.00
IUUC-Kpa-049402 Komagataella pastoris 29.30 1.00e-62 233.00
IUUC-Lch-049526 Latimeria chalumnae 30.89 6.00e-77 280.00
IUUC-Lpe-051560 Leersia perrieri 33.15 2.00e-51 196.00
IUUC-Loc-052882 Lepisosteus oculatus 32.65 5.00e-84 304.00
IUUC-Lma-053212 Leptosphaeria maculans 25.07 3.00e-49 188.00
IUUC-Laf-053859 Loxodonta africana 33.28 4.00e-87 314.00
IUUC-Mcc-054957 Macaca mulatta 34.24 1.00e-77 282.00
IUUC-Meu-056766 Macropus eugenii 29.06 2.00e-63 235.00
IUUC-Mor-057024 Magnaporthe oryzae 28.06 8.00e-31 127.00
IUUC-Mpo-057520 Magnaporthe poae 25.48 3.00e-41 162.00
IUUC-Mtr-058754 Medicago truncatula 27.90 5.00e-66 244.00
IUUC-Mla-058881 Melampsora laricipopulina 31.54 2.00e-50 192.00
IUUC-Mga-059776 Meleagris gallopavo 33.16 4.00e-87 314.00
IUUC-Mvi-060208 Microbotryum violaceum 34.08 1.00e-49 190.00
IUUC-Mmr-061783 Microcebus murinus 34.24 1.00e-77 282.00
IUUC-Mdo-062856 Monodelphis domestica 33.28 7.00e-87 313.00
IUUC-Mmu-064218 Mus musculus 33.45 1.00e-86 313.00
IUUC-Mac-064886 Musa acuminata 37.28 5.00e-44 171.00
IUUC-Mpu-065735 Mustela putorius furo 33.45 1.00e-86 313.00
IUUC-Mlu-067544 Myotis lucifugus 33.39 2.00e-85 308.00
IUUC-Nfi-068502 Neosartorya fischeri 26.15 3.00e-54 205.00
IUUC-Ncr-068891 Neurospora crassa 25.68 3.00e-42 166.00
IUUC-Nle-069389 Nomascus leucogenys 33.45 7.00e-87 313.00
IUUC-Opr-071042 Ochotona princeps 34.38 1.00e-54 206.00
IUUC-Ont-071455 Oreochromis niloticus 33.11 6.00e-88 317.00
IUUC-Oan-073181 Ornithorhynchus anatinus 33.28 8.00e-86 310.00
IUUC-Ocu-073758 Oryctolagus cuniculus 33.84 5.00e-90 324.00
IUUC-Oba-075739 Oryza barthii 32.14 2.00e-44 172.00
IUUC-Obr-076111 Oryza brachyantha 27.49 4.00e-58 218.00
IUUC-Ogl-077914 Oryza glaberrima 26.81 2.00e-47 182.00
IUUC-Ogu-078190 Oryza glumaepatula 37.50 3.00e-49 188.00
IUUC-Oin-079473 Oryza indica 32.61 3.00e-47 182.00
IUUC-Olo-080645 Oryza longistaminata 36.04 1.00e-39 156.00
IUUC-Ome-081831 Oryza meridionalis 37.20 7.00e-41 160.00
IUUC-Oni-082431 Oryza nivara 37.50 4.00e-49 187.00
IUUC-Opu-083239 Oryza punctata 36.96 2.00e-41 162.00
IUUC-Oru-085154 Oryza rufipogon 37.50 8.00e-49 186.00
IUUC-Osa-086189 Oryza sativa 32.61 3.00e-47 181.00
IUUC-Ola-086574 Oryzias latipes 30.79 6.00e-89 320.00
IUUC-Olu-087616 Ostreococcus lucimarinus 28.84 2.00e-37 149.00
IUUC-Oga-088827 Otolemur garnettii 33.45 1.00e-86 313.00
IUUC-Oar-089648 Ovis aries 33.16 9.00e-87 313.00
IUUC-Ptr-091195 Pan troglodytes 33.45 8.00e-87 313.00
IUUC-Pan-091978 Papio anubis 33.45 8.00e-87 313.00
IUUC-Psi-093598 Pelodiscus sinensis 33.16 5.00e-81 293.00
IUUC-Pma-094593 Petromyzon marinus 30.31 1.00e-34 139.00
IUUC-Pno-094823 Phaeosphaeria nodorum 25.08 5.00e-53 201.00
IUUC-Ppa-095455 Physcomitrella patens 29.33 1.00e-55 209.00
IUUC-Pfo-097120 Poecilia formosa 32.88 5.00e-85 307.00
IUUC-Pab-098771 Pongo abelii 33.45 7.00e-87 313.00
IUUC-Pop-099134 Populus trichocarpa 28.80 2.00e-62 232.00
IUUC-Pca-100727 Procavia capensis 29.62 2.00e-42 165.00
IUUC-Ppe-101686 Prunus persica 28.60 4.00e-59 221.00
IUUC-Pva-102414 Pteropus vampyrus 31.70 2.00e-74 272.00
IUUC-Pgr-103603 Puccinia graminis 29.37 2.00e-45 176.00
IUUC-Ptt-103995 Puccinia triticina 30.21 2.00e-40 160.00
IUUC-Pte-104359 Pyrenophora teres 26.11 4.00e-49 188.00
IUUC-Pyt-104523 Pyrenophora triticirepentis 26.28 3.00e-49 188.00
IUUC-Rno-105064 Rattus norvegicus 33.73 5.00e-87 314.00
IUUC-Sce-106186 Saccharomyces cerevisiae 31.09 1.00e-52 199.00
IUUC-Sha-106582 Sarcophilus harrisii 33.06 9.00e-87 313.00
IUUC-Sja-107683 Schizosaccharomyces japonicus 26.46 8.00e-59 220.00
IUUC-Spo-108142 Schizosaccharomyces pombe 26.85 2.00e-60 226.00
IUUC-Ssl-108456 Sclerotinia sclerotiorum 23.85 5.00e-43 168.00
IUUC-Smo-109097 Selaginella moellendorffii 28.86 8.00e-61 226.00
IUUC-Sit-109804 Setaria italica 27.33 8.00e-54 203.00
IUUC-Sly-111693 Solanum lycopersicum 29.30 2.00e-57 216.00
IUUC-Sar-113412 Sorex araneus 30.90 4.00e-45 174.00
IUUC-Sbi-114849 Sorghum bicolor 28.50 2.00e-54 205.00
IUUC-Sre-114945 Sporisorium reilianum 39.03 1.00e-43 170.00
IUUC-Ssc-115582 Sus scrofa 33.10 1.00e-76 279.00
IUUC-Tgu-116899 Taeniopygia guttata 33.11 7.00e-86 310.00
IUUC-Tru-118011 Takifugu rubripes 32.99 3.00e-85 308.00
IUUC-Tni-120598 Tetraodon nigroviridis 32.15 3.00e-83 301.00
IUUC-Tca-121247 Theobroma cacao 28.26 5.00e-64 237.00
IUUC-Tre-121949 Trichoderma reesei 27.25 5.00e-39 154.00
IUUC-Tvi-122626 Trichoderma virens 26.28 2.00e-36 146.00
IUUC-Tae-123335 Triticum aestivum 35.28 8.00e-50 190.00
IUUC-Tur-126005 Triticum urartu 27.32 4.00e-42 164.00
IUUC-Tme-126904 Tuber melanosporum 26.06 5.00e-52 197.00
IUUC-Tbe-127254 Tupaia belangeri 31.70 1.00e-76 279.00
IUUC-Ttr-128544 Tursiops truncatus 33.45 7.00e-87 313.00
IUUC-Uma-129379 Ustilago maydis 29.32 1.00e-42 167.00
IUUC-Vda-129761 Verticillium dahliae 23.70 8.00e-30 124.00
IUUC-Vpa-130485 Vicugna pacos 33.45 1.00e-86 313.00
IUUC-Vvi-131171 Vitis vinifera 28.87 7.00e-63 234.00
IUUC-Xtr-132762 Xenopus tropicalis 29.17 1.00e-67 249.00
IUUC-Xma-133583 Xiphophorus maculatus 33.05 2.00e-85 308.00
IUUC-Yli-134446 Yarrowia lipolytica 29.87 3.00e-63 235.00
IUUC-Zma-135722 Zea mays 29.08 6.00e-54 204.00
Created Date 25-Jun-2017

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