iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114434

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G068100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g005930	Sb10g005930.1	Sb10g005930.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.30e-07	32.8	129	171

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f  +d +++lp CgH+fh  C+ +w         + +CPlCr
   Q: 129  CAVCLCEFadDDKLRLLPtCGHAFHVPCIDAW------LLSHSTCPLCR 171
           ********88556*******************......89999*****8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDASPAPPPP GSPAIERKLS PGVLLLIAIL AMVFFIFGLL NLLAQNLLRL RRARRRRRRV 60
GDAAAATAPD GSSPTAFQGE LRQLFHLHDA GVDQSFIDAL PVFPYRAVAV VRRARAAAKD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGCTT CTCCTGCACC GCCGCCGCCG GGGTCTCCGG CCATCGAGCG GAAGCTGAGC 60
CCGGGGGTGC TGCTCCTCAT CGCGATCCTG GCCATGGTCT TCTTCATCTT CGGCCTGCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_10g005930

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Lpe-050872	Leersia perrieri	52.70	1.00e-69	255.00
IUUC-Opu-083776	Oryza punctata	55.07	2.00e-64	238.00
IUUC-Sit-110194	Setaria italica	67.27	3.00e-90	324.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence