iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017320

Ensembl Protein ID

Bra024318.1-P

UniProt Accession

M4E6B4; M4E6B4_BRARP

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra024318	Bra024318.1	Bra024318.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.50e-29	101.0	10	80

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           vp++f+CpIsl++M+ Pv l++G+tydr+sI++wl+ g++tcP t+q l+++d++Pn tl+rli+ w ++ 
   Q: 10   VPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNRTLQRLIEIWSDSV 80
           8******************************************************************9875 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MRKDDLYITV PSFFRCPISL DVMKSPVSLC TGVTYDRASI QRWLDGGNNT CPATMQILQN 60
KDFIPNRTLQ RLIEIWSDSV RRRASVEPSE LAAPTRDEIA DAIDRVKVEK EERFDREVLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGGAAAG ACGATCTATA CATCACCGTA CCAAGCTTCT TCCGATGTCC TATATCCTTA 60
GACGTCATGA AATCTCCGGT GAGTCTTTGC ACCGGCGTGA CCTACGACCG CGCTAGCATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0010200--P:response to chitin

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002532	Amborella trichopoda	44.00	1.00e-93	336.00
IUUC-Aly-005744	Arabidopsis lyrata	89.50	0.00e+00	690.00
IUUC-Ath-007332	Arabidopsis thaliana	88.10	0.00e+00	690.00
IUUC-Bol-015831	Brassica oleracea	97.37	0.00e+00	788.00
IUUC-Gma-042668	Glycine max	52.57	1.00e-117	416.00
IUUC-Lpe-050910	Leersia perrieri	69.33	3.00e-29	121.00
IUUC-Mtr-057795	Medicago truncatula	55.56	3.00e-128	451.00
IUUC-Mac-064700	Musa acuminata	34.16	8.00e-51	194.00
IUUC-Obr-076177	Oryza brachyantha	69.33	4.00e-29	121.00
IUUC-Ogl-077051	Oryza glaberrima	75.38	8.00e-27	114.00
IUUC-Ogu-078852	Oryza glumaepatula	40.46	1.00e-33	137.00
IUUC-Oin-079861	Oryza indica	40.46	1.00e-33	137.00
IUUC-Olo-080672	Oryza longistaminata	75.38	9.00e-27	113.00
IUUC-Ome-081099	Oryza meridionalis	41.28	6.00e-34	138.00
IUUC-Oni-083066	Oryza nivara	40.46	1.00e-33	137.00
IUUC-Opu-083818	Oryza punctata	73.24	8.00e-30	124.00
IUUC-Oru-085038	Oryza rufipogon	73.24	9.00e-30	124.00
IUUC-Osa-086178	Oryza sativa	39.18	4.00e-30	125.00
IUUC-Pop-099916	Populus trichocarpa	51.89	8.00e-119	420.00
IUUC-Ppe-101668	Prunus persica	54.57	9.00e-128	449.00
IUUC-Sit-110583	Setaria italica	40.00	7.00e-32	131.00
IUUC-Sly-111549	Solanum lycopersicum	47.11	3.00e-105	375.00
IUUC-Stu-112738	Solanum tuberosum	48.05	1.00e-105	375.00
IUUC-Sre-115187	Sporisorium reilianum	46.51	3.00e-07	48.90
IUUC-Tca-121270	Theobroma cacao	56.87	3.00e-122	431.00
IUUC-Tae-123322	Triticum aestivum	65.52	1.00e-29	123.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence