iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-044004

UUCD1 version

UUC-GlM-00700

Ensembl Protein ID

GLYMA13G37350.3

UniProt Accession

I1M3T6; I1M3T6_SOYBN

Genbank Protein ID

KRH22397.1; KRH22398.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000846; CM000846

Gene Name

LOC100785491; GLYMA_13G297700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA13G37350	GLYMA13G37350.3	GLYMA13G37350.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.00e-07	32.5	46	94
E3 activity/RING/U-box	6.30e-08	34.2	44	105

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw....pglknssskefrCPlCr 46
           C iCle  +d p+v+ CgH+++  C++kw      ++ ++  +++CP+C+
   Q: 46   CNICLECVQD-PVVTLCGHLYCWPCIYKWlnlqTASSENEEEKQQCPVCK 94
           99********.9999***************999777777888888****7 PP

E3 activity/RING/U-box

   S: 6    flCpIslelMrdPvvlpsGitydrssIekwlasggk.........tcPvtrqplteedlvPn 58
           f C I le  +dPvv+ +G+ y   +I kwl+ +           +cPv+++++++++lvP 
   Q: 44   FDCNICLECVQDPVVTLCGHLYCWPCIYKWLNLQTAsseneeekqQCPVCKSEISQSSLVPL 105
           99*****************************65555556678889***************96 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MALDQYFDEA VPQLDSLEDK SSLETWKCGS DDIADSDRNA SGGFDCNICL ECVQDPVVTL 60
CGHLYCWPCI YKWLNLQTAS SENEEEKQQC PVCKSEISQS SLVPLYGRGQ TVLPSKGKGH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAATTGGTA AACCGGTGGG CAAGCCGCGG CGTTGGGTTT TTTATTTTTT ATTTTCTCTT 60
ATAAAAAATG ATTAATCCGT ACCAGTGGTA GAAGCTTGAT GGAAGCTACT GTTGATTGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:0016021--C:integral component of membrane
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000767	Aegilops tauschii	37.00	1.00e-30	126.00
IUUC-Bdi-014949	Brachypodium distachyon	38.25	5.00e-28	117.00
IUUC-Lpe-051528	Leersia perrieri	33.99	2.00e-27	116.00
IUUC-Mtr-058147	Medicago truncatula	67.09	5.00e-91	327.00
IUUC-Obr-076866	Oryza brachyantha	35.27	9.00e-26	110.00
IUUC-Ogl-077734	Oryza glaberrima	35.69	7.00e-28	117.00
IUUC-Ogu-078280	Oryza glumaepatula	35.69	6.00e-28	117.00
IUUC-Oin-079906	Oryza indica	35.69	6.00e-28	117.00
IUUC-Olo-081070	Oryza longistaminata	35.69	8.00e-28	117.00
IUUC-Ome-081915	Oryza meridionalis	35.69	6.00e-28	117.00
IUUC-Oni-082950	Oryza nivara	35.69	6.00e-28	117.00
IUUC-Opu-083549	Oryza punctata	34.25	6.00e-27	114.00
IUUC-Osa-085904	Oryza sativa	35.69	6.00e-28	117.00
IUUC-Pop-099799	Populus trichocarpa	54.44	1.00e-73	269.00
IUUC-Ppe-101414	Prunus persica	51.19	8.00e-67	246.00
IUUC-Sit-110543	Setaria italica	36.60	1.00e-31	129.00
IUUC-Stu-112136	Solanum tuberosum	45.08	2.00e-54	204.00
IUUC-Sbi-114178	Sorghum bicolor	35.78	8.00e-32	130.00
IUUC-Tca-121702	Theobroma cacao	56.49	5.00e-76	277.00
IUUC-Vvi-131259	Vitis vinifera	49.39	2.00e-63	236.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence