iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114701

UUCD1 version

UUC-SoB-01091

Ensembl Protein ID

Sb06g016320.1

UniProt Accession

A0A1B6PKV3; A0A1B6PKV3_SORBI

Genbank Protein ID

KXG26285.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000765

Gene Name

SORBI_006G076300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb06g016320	Sb06g016320.1	Sb06g016320.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.30e-08	36.0	117	159

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl+df   ++++vlp C+H fh  C+ +w         + +CP+Cr
   Q: 117  CAICLSDFeaGEHVRVLPkCKHGFHVRCIDRW------LLARSTCPTCR 159
           ********66333*******************......99999*****8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MEYPRRTLLH TPFSGHPSSP SHPLDGAAAT DSGAPGSNFD ANIVMILAVL LCALICALGL 60
NSIVRCALRC SSQIVVGPEP NQATRLAQSG MRRKALRAMP ILVYSAGLKL NAANPMCAIC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGTACC CAAGAAGGAC ACTGCTGCAC ACTCCATTCT CTGGGCATCC CTCTAGTCCA 60
AGCCACCCAT TAGATGGAGC CGCGGCCACA GATAGTGGGG CTCCAGGAAG CAACTTCGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002440	Amborella trichopoda	58.46	2.00e-29	120.00
IUUC-Aly-006297	Arabidopsis lyrata	46.67	3.00e-37	147.00
IUUC-Bdi-014146	Brachypodium distachyon	74.74	1.00e-72	264.00
IUUC-Bol-016181	Brassica oleracea	50.29	1.00e-34	138.00
IUUC-Bra-017634	Brassica rapa	49.71	3.00e-34	137.00
IUUC-Gma-044255	Glycine max	44.39	1.00e-43	169.00
IUUC-Hvu-047571	Hordeum vulgare	72.73	2.00e-62	230.00
IUUC-Lpe-051348	Leersia perrieri	79.70	5.00e-79	285.00
IUUC-Mac-065335	Musa acuminata	55.61	4.00e-44	170.00
IUUC-Oba-075992	Oryza barthii	64.40	3.00e-61	227.00
IUUC-Obr-076307	Oryza brachyantha	79.89	9.00e-63	231.00
IUUC-Ogl-077735	Oryza glaberrima	81.40	4.00e-60	223.00
IUUC-Ogu-078127	Oryza glumaepatula	59.92	2.00e-61	228.00
IUUC-Olo-080939	Oryza longistaminata	79.10	6.00e-61	225.00
IUUC-Ome-081946	Oryza meridionalis	79.10	1.00e-59	222.00
IUUC-Oni-083084	Oryza nivara	68.55	1.00e-62	232.00
IUUC-Opu-084141	Oryza punctata	79.04	2.00e-56	211.00
IUUC-Oru-084596	Oryza rufipogon	63.71	3.00e-61	227.00
IUUC-Osa-085865	Oryza sativa	79.10	3.00e-60	223.00
IUUC-Pop-099910	Populus trichocarpa	49.75	4.00e-54	203.00
IUUC-Ppe-101930	Prunus persica	50.76	1.00e-48	185.00
IUUC-Sit-110398	Setaria italica	86.73	5.00e-76	275.00
IUUC-Sly-111257	Solanum lycopersicum	45.71	3.00e-29	120.00
IUUC-Stu-112198	Solanum tuberosum	43.33	3.00e-42	163.00
IUUC-Tca-121408	Theobroma cacao	44.07	6.00e-36	142.00
IUUC-Tae-123289	Triticum aestivum	75.38	5.00e-62	229.00
IUUC-Tur-126213	Triticum urartu	78.57	9.00e-41	157.00
IUUC-Vvi-130980	Vitis vinifera	51.57	2.00e-33	134.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence