iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oin-079232

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000129

Gene Name

OsI_15850

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BGIOSGA015122	BGIOSGA015122-TA	BGIOSGA015122-PA

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/U-box	U-box	24486490

Classification

Family	E-value	Score	Start	End
E3 activity/RING/U-box	1.40e-32	112.6	14	90

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqpl..teedlvPnltlrrliqawceenss 74
           evp++f+CpIsle+MrdPv+l++Gitydr+sIe+w+ ++g+ +cPvt+q+l  ++++ +Pn+tlrrliq wc+ +++
   Q: 14   EVPSYFMCPISLEIMRDPVTLSTGITYDRESIERWVFTDGHgECPVTKQRLapADREPTPNHTLRRLIQGWCAVHAV 90
           69**********************************555555*********7666777***************9976 PP

Organism

Oryza indica

Protein Sequence
(Fasta)

MGEESSPAAA PAVEVPSYFM CPISLEIMRD PVTLSTGITY DRESIERWVF TDGHGECPVT 60
KQRLAPADRE PTPNHTLRRL IQGWCAVHAV ERFPTPRPPV DAARVAAIVD AARPLLRRRR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTGAGG AGTCGTCGCC GGCGGCGGCG CCGGCGGTGG AGGTGCCGTC CTACTTCATG 60
TGCCCGATCT CGCTGGAGAT CATGCGGGAC CCGGTGACGC TGTCGACGGG GATCACCTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000554	Aegilops tauschii	72.56	1.00e-151	528.00
IUUC-Bdi-014365	Brachypodium distachyon	67.46	3.00e-148	517.00
IUUC-Fox-037866	Fusarium oxysporum	39.66	6.00e-02	32.70
IUUC-Lpe-051489	Leersia perrieri	70.47	1.00e-141	495.00
IUUC-Oba-075116	Oryza barthii	77.91	1.00e-102	364.00
IUUC-Obr-076783	Oryza brachyantha	79.05	6.00e-106	375.00
IUUC-Ogl-077357	Oryza glaberrima	93.42	0.00e+00	693.00
IUUC-Ogu-078170	Oryza glumaepatula	91.47	0.00e+00	646.00
IUUC-Ome-081385	Oryza meridionalis	91.68	0.00e+00	698.00
IUUC-Oni-082736	Oryza nivara	96.77	0.00e+00	643.00
IUUC-Opu-083559	Oryza punctata	86.59	2.00e-160	558.00
IUUC-Oru-084866	Oryza rufipogon	98.85	0.00e+00	681.00
IUUC-Sit-110187	Setaria italica	68.89	3.00e-123	434.00
IUUC-Tae-122907	Triticum aestivum	72.34	6.00e-151	526.00
IUUC-Tur-126719	Triticum urartu	72.34	4.00e-151	526.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence