iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099993

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000340

Gene Name

POPTRDRAFT_759483; POPTR_0004s12100g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0004s12100	POPTR_0004s12100.1	POPTR_0004s12100.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.50e-09	37.5	83	124

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl+++   ++ ++ +pC+H fh  C+++w       + + +CP+Cr
   Q: 83   CAICLNEIgigSE-LREMPCKHGFHSGCIEQW------LRIHGSCPVCR 124
           *******988555.999***************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSSGDTNMMQ DSDSNSHQQP HILPGNIRQI FQHAINDVFA VRAAIRSTNQ DGNSNTTARR 60
LPASRDAIDA MPRITVQEGG NDCAICLNEI GIGSELREMP CKHGFHSGCI EQWLRIHGSC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTAGTG GTGACACAAA CATGATGCAA GATTCAGATT CAAATTCGCA TCAACAACCC 60
CATATTTTGC CTGGAAACAT AAGACAAATA TTCCAACATG CCATCAATGA TGTTTTTGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0004s12100g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Sit-110029	Setaria italica	39.29	6.00e-13	66.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence