iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107761

Ensembl Protein ID

EEB05536

UniProt Accession

B6JVY5; B6JVY5_SCHJY

Genbank Protein ID

EEB05536.1

Protein Name

WD40/YVTN repeat-like protein

Genbank Nucleotide ID

KE651166

Gene Name

SJAG_00550

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_00550	EEB05536	EEB05536

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.10e-09	33.4	312	343

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           H d   c+a+ ++ ++++++s D + ++WD r
   Q: 312  HMDYSVCCAWhPNgNHFATSSQDTSTRIWDAR 343
           778888999**777****************65 PP

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MSEISEDDHS SFEQYSELKY CETVQDYFAD FIYSDLFEGN DACLEKNVLD YPTSSNFWLP 60
SNKSDCVEGP LNGITDSQGI PWGSIALGER FAFREYRLSN YVTTCNSTEW YPSLFPVQST 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCATACAGA GTCAATCAAA TCTAGCAATT CATTTCTCGC ACGTTCCATT CCTGTGGTAG 60
CTTGTCGTCT ACTATTACTA CTTCCTTAAC TCGTTCTTGT GAGACAAGGT TCGTAGTAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR013979--TIF_beta_prop-like
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08662--eIF2A

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001117	Aegilops tauschii	31.91	7.00e-48	182.00
IUUC-Atr-002734	Amborella trichopoda	32.95	4.00e-52	196.00
IUUC-Aly-006558	Arabidopsis lyrata	35.64	4.00e-45	173.00
IUUC-Ath-006618	Arabidopsis thaliana	36.15	3.00e-46	177.00
IUUC-Bdi-014366	Brachypodium distachyon	33.07	5.00e-49	186.00
IUUC-Bol-015525	Brassica oleracea	34.31	2.00e-49	187.00
IUUC-Bra-017676	Brassica rapa	34.04	2.00e-49	187.00
IUUC-Cme-027214	Cyanidioschyzon merolae	31.27	9.00e-28	117.00
IUUC-Dse-031456	Dothistroma septosporum	32.80	2.00e-24	104.00
IUUC-Gma-043334	Glycine max	31.54	2.00e-48	184.00
IUUC-Hvu-047718	Hordeum vulgare	33.67	2.00e-51	194.00
IUUC-Kpa-049267	Komagataella pastoris	25.18	2.00e-18	85.10
IUUC-Lpe-051582	Leersia perrieri	33.51	5.00e-47	179.00
IUUC-Mtr-058564	Medicago truncatula	32.98	6.00e-48	182.00
IUUC-Mac-064914	Musa acuminata	32.80	2.00e-49	187.00
IUUC-Oba-075469	Oryza barthii	32.91	2.00e-52	197.00
IUUC-Obr-076922	Oryza brachyantha	33.78	8.00e-54	202.00
IUUC-Ogl-077272	Oryza glaberrima	31.58	6.00e-48	182.00
IUUC-Ogu-077978	Oryza glumaepatula	32.91	2.00e-52	197.00
IUUC-Oin-079991	Oryza indica	34.22	1.00e-47	181.00
IUUC-Olo-080502	Oryza longistaminata	33.33	3.00e-52	197.00
IUUC-Ome-081872	Oryza meridionalis	34.22	4.00e-47	179.00
IUUC-Oni-082262	Oryza nivara	32.65	2.00e-51	194.00
IUUC-Opu-083138	Oryza punctata	32.49	5.00e-51	193.00
IUUC-Oru-084351	Oryza rufipogon	32.65	9.00e-52	195.00
IUUC-Osa-085692	Oryza sativa	33.16	1.00e-53	201.00
IUUC-Pop-099666	Populus trichocarpa	30.83	4.00e-45	173.00
IUUC-Pte-104305	Pyrenophora teres	25.40	4.00e-32	130.00
IUUC-Pyt-104723	Pyrenophora triticirepentis	26.67	9.00e-34	136.00
IUUC-Spo-108140	Schizosaccharomyces pombe	36.53	9.00e-74	268.00
IUUC-Smo-109570	Selaginella moellendorffii	32.42	3.00e-48	184.00
IUUC-Sit-110785	Setaria italica	32.53	1.00e-45	175.00
IUUC-Sly-111186	Solanum lycopersicum	35.34	3.00e-54	204.00
IUUC-Stu-111950	Solanum tuberosum	36.13	8.00e-55	205.00
IUUC-Sbi-114333	Sorghum bicolor	33.78	1.00e-50	191.00
IUUC-Tca-121187	Theobroma cacao	32.10	4.00e-45	173.00
IUUC-Tae-124553	Triticum aestivum	32.74	5.00e-50	189.00
IUUC-Tur-126211	Triticum urartu	32.48	6.00e-47	179.00
IUUC-Vvi-131311	Vitis vinifera	33.08	5.00e-52	196.00
IUUC-Yli-134594	Yarrowia lipolytica	30.69	5.00e-21	94.00
IUUC-Zma-135500	Zea mays	32.70	3.00e-49	187.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence