iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015331

Ensembl Protein ID

Bo1g024100.1

UniProt Accession

A0A0D3A4U1; A0A0D3A4U1_BRAOL

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo1g024100	Bo1g024100.1	Bo1g024100.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.90e-29	103.0	5	75

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpl.teedlvPnltlrrliqawcee 71
           +p +f+CpIsle+M+dPv+++sG+t+dr sI++w++sg++tcP+t+ pl ++ +l+Pn++lr+li+++ + 
   Q: 5    LPNDFRCPISLEIMSDPVIIQSGHTFDRVSIQRWIDSGNRTCPITKLPLsENPSLIPNHALRSLISNFAHV 75
           799**********************************************667799***********99875 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MAFELPNDFR CPISLEIMSD PVIIQSGHTF DRVSIQRWID SGNRTCPITK LPLSENPSLI 60
PNHALRSLIS NFAHVSPKQE DHSHSQSQSH SSISTLVSRS SSRESRLESL TRLVRLTKRD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGTTCG AGCTCCCAAA CGATTTCAGG TGCCCGATCT CCCTCGAGAT TATGTCCGAC 60
CCGGTTATCA TCCAATCGGG TCACACTTTC GACCGCGTCT CCATCCAACG GTGGATTGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002776	Amborella trichopoda	47.95	5.00e-66	244.00
IUUC-Aly-006175	Arabidopsis lyrata	88.24	2.00e-168	584.00
IUUC-Ath-006926	Arabidopsis thaliana	87.43	3.00e-166	577.00
IUUC-Bra-017717	Brassica rapa	92.49	1.00e-151	529.00
IUUC-Gma-043375	Glycine max	60.66	1.00e-88	319.00
IUUC-Mtr-058590	Medicago truncatula	58.18	5.00e-103	367.00
IUUC-Mac-065427	Musa acuminata	77.78	3.00e-26	111.00
IUUC-Pop-100028	Populus trichocarpa	58.56	3.00e-105	374.00
IUUC-Ppe-101638	Prunus persica	62.33	1.00e-118	419.00
IUUC-Sit-110168	Setaria italica	43.42	2.00e-43	169.00
IUUC-Sly-111598	Solanum lycopersicum	58.58	5.00e-97	347.00
IUUC-Stu-112509	Solanum tuberosum	59.89	8.00e-96	343.00
IUUC-Tca-121293	Theobroma cacao	66.58	2.00e-124	438.00
IUUC-Tae-124445	Triticum aestivum	42.74	1.00e-52	200.00
IUUC-Vvi-131324	Vitis vinifera	64.23	2.00e-119	421.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence