iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131324

UUCD1 version

UUC-ViV-00645

Ensembl Protein ID

VIT_00s0374g00050.t01

UniProt Accession

F6HDF0; F6HDF0_VITVI

Genbank Protein ID

CCB50245.1; CCB60957.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

FN595737; FN596520

Gene Name

VIT_00s0374g00050; VIT_00s2364g00010

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_00s0374g00050	VIT_00s0374g00050.t01	VIT_00s0374g00050.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	7.00e-31	106.7	86	154

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpl.teedlvPnltlrrliqawc 69
            p++f+CpIsle+M+dPv+l+sG+t+drssI++wl+sg++tcP+t+ pl ++ +l+Pn++lr+li+++ 
   Q: 86   FPDDFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDSGHRTCPITKLPLsEHPSLIPNHALRSLISNYT 154
           69***********************************************777799***********997 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MGGPKYPSNF KSYVNHSPVN IKGIMVTEVA FIPTSQARVL SLRFISSICP TRKDQNLKNP 60
LLSWKEESSI LEREGGRSEL RMATQFPDDF KCPISLEIMS DPVILSSGHT FDRSSIQRWL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCGGTC CAAAGTACCC CTCCAACTTC AAATCCTATG TCAACCACAG CCCGGTCAAC 60
ATCAAGGGTA TTATGGTAAC TGAGGTCGCC TTTATACCCA CGTCACAGGC TAGGGTCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

vvi:100855109

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002776	Amborella trichopoda	53.53	2.00e-79	288.00
IUUC-Aly-006175	Arabidopsis lyrata	65.14	5.00e-124	436.00
IUUC-Ath-006926	Arabidopsis thaliana	64.50	2.00e-123	434.00
IUUC-Bol-015331	Brassica oleracea	63.84	9.00e-108	382.00
IUUC-Bra-017717	Brassica rapa	62.87	1.00e-98	352.00
IUUC-Gma-043375	Glycine max	68.68	3.00e-114	404.00
IUUC-Mtr-058590	Medicago truncatula	67.75	5.00e-125	439.00
IUUC-Opu-084129	Oryza punctata	46.62	2.00e-22	99.00
IUUC-Pop-099846	Populus trichocarpa	68.62	2.00e-133	468.00
IUUC-Ppe-101638	Prunus persica	77.51	2.00e-154	537.00
IUUC-Sit-110168	Setaria italica	46.35	4.00e-52	197.00
IUUC-Sly-111598	Solanum lycopersicum	69.51	2.00e-126	444.00
IUUC-Stu-112509	Solanum tuberosum	68.58	1.00e-122	432.00
IUUC-Tca-121293	Theobroma cacao	76.03	3.00e-152	530.00
IUUC-Tae-124445	Triticum aestivum	44.90	2.00e-58	218.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence