iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cja-019353

UUCD1 version

UUC-CaJ-00693

Ensembl Protein ID

ENSCJAP00000044695.1

UniProt Accession

F7HBJ4; F7HBJ4_CALJA

Genbank Protein ID

JAB10976.1; JAB18166.1; JAB37770.1; JAB47850.1

Protein Name

E3 ubiquitin-protein ligase RNF13

Genbank Nucleotide ID

ACFV01000262; GAMS01004970; GAMQ01004081; GAMP01004905

Gene Name

RNF13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000001297.2	ENSCJAT00000062422.1	ENSCJAP00000044695.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.00e-09	36.8	240	282

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl++++dg  +++lpC H++h +C+  w     +++++ +CP+C+
   Q: 240  CAICLDEYEDGdkLRILPCSHAYHCKCVDPW-----LTKTKKTCPVCK 282
           ********66666******************.....899********7 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

MLLSIGMLML SATQVYTILT VQLFAFLNLL PVEADILAYN FENASQTFDD LPARFGYRLP 60
AEGLKGFLIN SKPENACEPI VPPPVKDNSS GTFIVLIRRL DCNFDIKVLN AQRAGYKAAI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGAGACTGT TGTGTTGCGG GGGCCAGACT TCCAGGTAAG AGACTGTCCG GCTTGGCGGC 60
AGCCGGGCAG CGGGTTATTG GGCGGCTCGG AGAACACACC CCGCTTGCTG GCCCTCGAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR003137--PA_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF02225--PA
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005829--C:cytosol
GO:0016021--C:integral component of membrane
GO:0031902--C:late endosome membrane
GO:0005765--C:lysosomal membrane
GO:0005654--C:nucleoplasm
GO:0016874--F:ligase activity
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0051865--P:protein autoubiquitination

KEGG

cjc:100399753

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001909	Ailuropoda melanoleuca	96.59	0.00e+00	642.00
IUUC-Atr-003055	Amborella trichopoda	31.45	7.00e-32	131.00
IUUC-Apl-004022	Anas platyrhynchos	90.81	2.00e-172	598.00
IUUC-Aca-004641	Anolis carolinensis	86.46	1.00e-166	578.00
IUUC-Aly-006519	Arabidopsis lyrata	32.68	1.00e-32	133.00
IUUC-Ani-009169	Aspergillus nidulans	37.84	7.00e-13	68.60
IUUC-Ame-010635	Astyanax mexicanus	72.50	1.00e-140	493.00
IUUC-Bgr-012131	Blumeria graminis	50.00	2.00e-12	68.20
IUUC-Bta-012593	Bos taurus	97.11	0.00e+00	687.00
IUUC-Bci-013936	Botrytis cinerea	35.14	5.00e-13	69.30
IUUC-Bdi-014479	Brachypodium distachyon	32.02	6.00e-28	117.00
IUUC-Bol-015396	Brassica oleracea	32.67	6.00e-23	101.00
IUUC-Bra-017689	Brassica rapa	32.74	7.00e-33	135.00
IUUC-Cel-018181	Caenorhabditis elegans	32.75	3.00e-29	122.00
IUUC-Cfa-020234	Canis familiaris	96.85	0.00e+00	642.00
IUUC-Cpo-021602	Cavia porcellus	94.17	2.00e-157	548.00
IUUC-Cre-022983	Chlamydomonas reinhardtii	37.93	1.00e-10	61.20
IUUC-Csa-023201	Chlorocebus sabaeus	98.95	0.00e+00	652.00
IUUC-Cho-024954	Choloepus hoffmanni	80.58	6.00e-147	513.00
IUUC-Cin-025554	Ciona intestinalis	42.47	1.00e-61	229.00
IUUC-Csv-025959	Ciona savignyi	44.44	4.00e-52	198.00
IUUC-Dre-028744	Danio rerio	77.54	2.00e-136	478.00
IUUC-Dno-029675	Dasypus novemcinctus	95.54	0.00e+00	633.00
IUUC-Dor-030791	Dipodomys ordii	77.95	2.00e-134	472.00
IUUC-Dse-031406	Dothistroma septosporum	43.33	2.00e-12	68.20
IUUC-Dme-031765	Drosophila melanogaster	39.36	2.00e-50	193.00
IUUC-Ete-032577	Echinops telfairi	84.91	1.00e-138	485.00
IUUC-Eca-034148	Equus caballus	95.54	0.00e+00	634.00
IUUC-Eeu-034552	Erinaceus europaeus	94.23	1.00e-176	612.00
IUUC-Fca-036021	Felis catus	96.59	0.00e+00	639.00
IUUC-Fal-037621	Ficedula albicollis	89.76	9.00e-170	589.00
IUUC-Fox-038011	Fusarium oxysporum	35.79	2.00e-13	70.50
IUUC-Gmo-039485	Gadus morhua	71.47	5.00e-135	473.00
IUUC-Gga-041166	Gallus gallus	90.81	3.00e-173	601.00
IUUC-Gac-042124	Gasterosteus aculeatus	76.56	9.00e-130	456.00
IUUC-Ggo-045344	Gorilla gorilla	99.21	0.00e+00	654.00
IUUC-Hsa-045960	Homo sapiens	99.21	0.00e+00	654.00
IUUC-Hvu-047136	Hordeum vulgare	34.52	7.00e-29	121.00
IUUC-Itr-048327	Ictidomys tridecemlineatus	95.01	0.00e+00	635.00
IUUC-Lch-050635	Latimeria chalumnae	82.19	5.00e-135	473.00
IUUC-Lpe-051192	Leersia perrieri	34.78	3.00e-29	123.00
IUUC-Loc-052869	Lepisosteus oculatus	79.20	1.00e-140	492.00
IUUC-Laf-054477	Loxodonta africana	94.23	0.00e+00	632.00
IUUC-Mcc-055232	Macaca mulatta	98.95	0.00e+00	652.00
IUUC-Meu-056237	Macropus eugenii	82.35	2.00e-116	411.00
IUUC-Mtr-058129	Medicago truncatula	32.68	4.00e-28	119.00
IUUC-Mla-059171	Melampsora laricipopulina	42.59	2.00e-10	60.80
IUUC-Mga-059780	Meleagris gallopavo	90.81	3.00e-173	600.00
IUUC-Mvi-060468	Microbotryum violaceum	46.00	4.00e-12	66.60
IUUC-Mmr-061384	Microcebus murinus	95.95	6.00e-178	616.00
IUUC-Mdo-062781	Monodelphis domestica	92.41	4.00e-179	620.00
IUUC-Mmu-063727	Mus musculus	92.91	2.00e-171	594.00
IUUC-Mac-065216	Musa acuminata	34.38	3.00e-30	126.00
IUUC-Mpu-066497	Mustela putorius furo	97.11	0.00e+00	642.00
IUUC-Mlu-067654	Myotis lucifugus	94.85	1.00e-114	405.00
IUUC-Nle-069368	Nomascus leucogenys	99.21	0.00e+00	654.00
IUUC-Opr-070934	Ochotona princeps	67.19	1.00e-109	389.00
IUUC-Ont-071868	Oreochromis niloticus	76.18	2.00e-129	455.00
IUUC-Oan-072733	Ornithorhynchus anatinus	86.12	2.00e-103	368.00
IUUC-Ocu-074083	Oryctolagus cuniculus	95.80	0.00e+00	636.00
IUUC-Oba-075841	Oryza barthii	33.33	3.00e-27	116.00
IUUC-Obr-076703	Oryza brachyantha	35.57	6.00e-30	125.00
IUUC-Ogl-077861	Oryza glaberrima	35.57	4.00e-30	125.00
IUUC-Ogu-078205	Oryza glumaepatula	34.78	5.00e-28	119.00
IUUC-Oin-080138	Oryza indica	32.56	6.00e-28	118.00
IUUC-Olo-081024	Oryza longistaminata	35.18	4.00e-29	123.00
IUUC-Ome-081844	Oryza meridionalis	35.57	6.00e-30	125.00
IUUC-Oni-082382	Oryza nivara	32.81	1.00e-29	124.00
IUUC-Opu-083162	Oryza punctata	35.18	3.00e-30	126.00
IUUC-Oru-085122	Oryza rufipogon	33.12	6.00e-28	118.00
IUUC-Osa-086175	Oryza sativa	35.57	3.00e-30	126.00
IUUC-Ola-086440	Oryzias latipes	74.01	2.00e-116	412.00
IUUC-Oga-088291	Otolemur garnettii	91.11	8.00e-167	579.00
IUUC-Oar-089911	Ovis aries	96.85	0.00e+00	686.00
IUUC-Ptr-091166	Pan troglodytes	99.21	0.00e+00	654.00
IUUC-Pan-092154	Papio anubis	98.95	0.00e+00	652.00
IUUC-Psi-093062	Pelodiscus sinensis	90.55	6.00e-169	586.00
IUUC-Pma-094545	Petromyzon marinus	73.21	5.00e-26	108.00
IUUC-Ppa-095928	Physcomitrella patens	34.47	3.00e-31	129.00
IUUC-Pfo-097232	Poecilia formosa	77.43	7.00e-133	466.00
IUUC-Pab-097909	Pongo abelii	98.95	0.00e+00	654.00
IUUC-Pop-099688	Populus trichocarpa	31.70	2.00e-22	99.40
IUUC-Pca-100724	Procavia capensis	78.32	9.00e-137	479.00
IUUC-Ppe-101605	Prunus persica	30.69	9.00e-28	117.00
IUUC-Pva-102624	Pteropus vampyrus	91.08	1.00e-165	575.00
IUUC-Pgr-103420	Puccinia graminis	55.32	3.00e-12	67.80
IUUC-Ptt-103943	Puccinia triticina	44.44	8.00e-11	62.00
IUUC-Pte-104044	Pyrenophora teres	47.27	2.00e-13	70.50
IUUC-Rno-105109	Rattus norvegicus	91.34	4.00e-164	570.00
IUUC-Sha-107563	Sarcophilus harrisii	92.15	3.00e-174	604.00
IUUC-Spo-108083	Schizosaccharomyces pombe	26.52	1.00e-14	73.90
IUUC-Ssl-108601	Sclerotinia sclerotiorum	41.07	8.00e-13	68.20
IUUC-Smo-109274	Selaginella moellendorffii	36.08	5.00e-32	131.00
IUUC-Sit-110628	Setaria italica	33.55	3.00e-31	129.00
IUUC-Sly-110842	Solanum lycopersicum	29.77	1.00e-28	120.00
IUUC-Sbi-114522	Sorghum bicolor	31.83	3.00e-28	119.00
IUUC-Sre-114989	Sporisorium reilianum	43.14	1.00e-12	68.90
IUUC-Ssc-116043	Sus scrofa	96.85	0.00e+00	639.00
IUUC-Tgu-116908	Taeniopygia guttata	89.01	4.00e-170	590.00
IUUC-Tru-118219	Takifugu rubripes	76.10	2.00e-132	465.00
IUUC-Tsy-119333	Tarsius syrichta	97.11	0.00e+00	635.00
IUUC-Tni-120332	Tetraodon nigroviridis	71.49	3.00e-89	321.00
IUUC-Tca-121333	Theobroma cacao	32.70	3.00e-27	115.00
IUUC-Tae-125320	Triticum aestivum	31.16	9.00e-30	124.00
IUUC-Tur-126455	Triticum urartu	32.61	2.00e-26	113.00
IUUC-Tbe-127859	Tupaia belangeri	85.53	5.00e-166	577.00
IUUC-Ttr-129219	Tursiops truncatus	86.88	1.00e-156	545.00
IUUC-Uma-129559	Ustilago maydis	52.08	2.00e-12	67.80
IUUC-Vda-129899	Verticillium dahliae	43.40	7.00e-13	68.60
IUUC-Vpa-130314	Vicugna pacos	94.49	7.00e-175	606.00
IUUC-Vvi-131355	Vitis vinifera	33.46	5.00e-29	122.00
IUUC-Xtr-132114	Xenopus tropicalis	75.56	3.00e-131	461.00
IUUC-Xma-133474	Xiphophorus maculatus	77.43	8.00e-133	466.00
IUUC-Yli-134442	Yarrowia lipolytica	44.68	4.00e-12	65.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence