iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114710

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitinyl hydrolase 1

Genbank Nucleotide ID

CM000766

Gene Name

SORBI_007G188000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb07g025785	Sb07g025785.1	Sb07g025785.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	4.40e-48	165.0	323	808

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkk.eaeefsgyeqqDaqEfl 96
           G+ N gNtCYm +vLQcL+ + +lre +l      l+      pk +l+k l+klf e  +      +p+e+l++++k +a++f   + +D++++l
   Q: 323  GIPNRGNTCYMSAVLQCLFVLGKLRERMLA-----LD-----RPKSRLAKVLKKLFLEA-SAAGDLLNPNEVLECVRKdCAPQFGVGAMEDSHDLL 407
           9*****************************.....43.....47889*********999.99999*********997637999***********99 PP
   S: 97   aflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvs.sreepfldlslpvpgkeetkke...... 185
           + l +  ++                        ++++ ++  +++++ +F++ +  ++ c++c++ s     pf+dlsl +p++ +  k+      
   Q: 408  TALRELWNQGE----------------------ENDSWQNDAPTVMDSIFGFVMARTLSCKKCGHLSpPVPYPFQDLSLGFPSNGHPTKSaalsqt 481
           88766666555......................3457789999************************99999**********9998888899**** PP
   S: 186  ........................................................................................slqdcLes 193
                                                                                                   s+qd+L  
   Q: 482  nesprsrnreivvqlfpadvqrnlekiqtvpasgysdvigsevaveetqkplevdstkvqrisqrkdvqsplliqegksvdsltadsvSIQDLLLL 577
           ************************************************************************************************ PP
   S: 194  ftkeeelegenkyycekck............................................................................. 212
           f++ +++     + c++c+                                                                             
   Q: 578  FSEDHQVA----WRCPNCTidheessasqskngeqtvgsgnedktvvrdqieqsdrtachgkesechggilpaekqtdllgtvkqseqartayllk 669
           *******8....*******99999999999999999999999999999999999999999999999999998888888887777666666666665 PP
   S: 213  ..kkqe........aekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsG..slssGHYv 296
             k  +        ++   +++ lP+vL+lhLkR   ++   + +ki+ +v f + Ld+++f+  +  + + ++ Y+L +vv H G  +l+sGHY+
   Q: 670  dsK--NvetddvgdSSMIYRFTMLPPVLTLHLKRS--RH-DTVGSKISGHVRFMEYLDVEQFMDPSFVD-EGSTCYRLAGVVEHIGkdTLRSGHYI 759
           551..055666666888999***************..44.46788*********99*******995544.469**************99******* PP
   S: 297  ayvkn......ekgk.......WllfdDskVtevkeeevleetgstaYvlfYkr 337
           ayv+       +  +       W++ +D+ + +v+ e+vl+   s+aY+lfY+r
   Q: 760  AYVRArrlgnqQ--EgsscsssWFRANDHCIGQVTLEQVLN---SEAYILFYER 808
           *****7777652..13466677*******************...********98 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGKTPPKEEA EGSPRNKAPR VDDAAPTTGS VASAPSPTGK TPPKGEEAEG SPRKKAPRLD 60
DAALALARGA SKPNPTGKSP TKEEAEGSPP KRSRSPRSKS PRRQDKRPLA ALPVPTVPES 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGAAGA CGCCTCCGAA GGAGGAGGCC GAGGGAAGCC CCCGGAATAA AGCTCCGCGG 60
GTGGACGACG CGGCTCCGAC TACGGGTTCT GTGGCGTCGG CACCGAGTCC GACGGGGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_07g025735

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Oba-075843	Oryza barthii	31.91	7.00e-57	216.00
IUUC-Olo-080801	Oryza longistaminata	33.53	1.00e-66	247.00
IUUC-Osa-086068	Oryza sativa	33.78	9.00e-58	217.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence