iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-108699

Ensembl Protein ID

EFJ19512

UniProt Accession

D8S8E2; D8S8E2_SELML

Genbank Protein ID

EFJ19512.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377606

Gene Name

SELMODRAFT_110788

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_110788	EFJ19512	EFJ19512

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.80e-11	42.2	2404	2442

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH d vtc+   ++ +l+vsGs Dgt+ ++ lr+g+ ++
   Q: 2404 GHDDAVTCVVVrTElDLVVSGSEDGTCILYTLRQGRYVR 2442
           8********7788899*****************998765 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

FRNVNSLQSV CDIGGLHKFI RLFRWAAFSF PVLYARSTEH LAEMSTRSST TTQEKEKDRF 60
FLGIEDVKDN YGPWNSNVSR LCEVLCSFVI ATWDIFSLSG PASQETSGVT SVYWENATRL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTCGTAATG TTAACAGCTT GCAGTCAGTC TGCGACATTG GTGGCTTACA CAAATTTATT 60
CGACTGTTTC GCTGGGCCGC GTTTTCCTTT CCGGTTCTAT ATGCCCGCAG TACCGAGCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000409--BEACH_dom
IPR013320--ConA-like_dom
IPR031570--DUF4704
IPR023362--PH-BEACH_dom
IPR011993--PH_dom-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50197--BEACH
PS51783--PH_BEACH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF02138--Beach
PF15787--DUF4704
PF14844--PH_BEACH
PF00400--WD40

SMART

SM01026--Beach
SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane

KEGG

smo:SELMODRAFT_110788

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002998	Amborella trichopoda	39.66	0.00e+00	1962.00
IUUC-Ath-007674	Arabidopsis thaliana	40.43	0.00e+00	1753.00
IUUC-Bol-015261	Brassica oleracea	39.76	0.00e+00	1699.00
IUUC-Bra-016877	Brassica rapa	40.56	0.00e+00	1680.00
IUUC-Gma-042772	Glycine max	39.04	0.00e+00	1816.00
IUUC-Hvu-047134	Hordeum vulgare	46.22	0.00e+00	1075.00
IUUC-Lpe-050958	Leersia perrieri	40.65	0.00e+00	1345.00
IUUC-Mtr-058372	Medicago truncatula	39.00	0.00e+00	1781.00
IUUC-Mac-064991	Musa acuminata	37.75	0.00e+00	1801.00
IUUC-Oba-075426	Oryza barthii	41.32	0.00e+00	1347.00
IUUC-Obr-076854	Oryza brachyantha	34.61	0.00e+00	965.00
IUUC-Ogu-078751	Oryza glumaepatula	43.08	0.00e+00	1173.00
IUUC-Oni-082349	Oryza nivara	41.17	0.00e+00	1364.00
IUUC-Opu-083178	Oryza punctata	38.78	0.00e+00	1735.00
IUUC-Ppa-095295	Physcomitrella patens	43.79	0.00e+00	1994.00
IUUC-Pop-099604	Populus trichocarpa	39.18	0.00e+00	1829.00
IUUC-Sit-110075	Setaria italica	41.92	0.00e+00	1298.00
IUUC-Sly-111033	Solanum lycopersicum	41.74	0.00e+00	1192.00
IUUC-Sbi-114049	Sorghum bicolor	35.32	0.00e+00	1159.00
IUUC-Tca-121572	Theobroma cacao	39.48	0.00e+00	1865.00
IUUC-Tae-124172	Triticum aestivum	33.75	0.00e+00	1020.00
IUUC-Vvi-130860	Vitis vinifera	39.95	0.00e+00	1888.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence