iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-130936

UUCD1 version

UUC-ViV-00318

Ensembl Protein ID

VIT_07s0005g06380.t01

UniProt Accession

D7U3J7; D7U3J7_VITVI

Genbank Protein ID

CBI37316.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596502

Gene Name

LUH; VIT_07s0005g06380

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_07s0005g06380	VIT_07s0005g06380.t01	VIT_07s0005g06380.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-25	88.5	546	572
UBD/Beta-Prp	1.00e-57	196.1	542	778

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf.sd.tllvsGsdDgtikvWD 29
            +t+++f ++ t l+++s+D+++++WD
   Q: 546  VITDIRFrPNsTQLATASYDKSVRLWD 572
           69******777**************** PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkl.lrslsgheaevtavkfspdgkilvtgseD..rtikvwdlstgkcvhtlkg 92
           +h+ vit++ f p++++lat+s+d+++++wd+ ++++ +  + gh + v +++f+p++ + + + +D  + i+ w++s ++c++++kg
   Q: 542  EHQFVITDIRFRPNSTQLATASYDKSVRLWDAAKPTYcVNAYTGHGSHVMSLDFHPKK-TDLFCFSDsnNEIRYWNISPFSCTRVFKG 628
           6888****************************9999857777***************7.677777776699****************9 PP
   S: 93   hedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgght 180
            + +v   +f+p   +l+++  d+++ ++d+et+  ++  l+gh+++vn+++++ +g  ++s s D  v++W++++g+++++l++ + 
   Q: 629  GNVQV---RFQPRIGHLLAAAMDKVVSIFDVETDRQIH-SLQGHSEMVNYLSWDANGEFMASVSPD-LVKVWSIASGECIHELSS-NG 710
           99776...69**99************************.*************************99.79***************9.** PP
   S: 181  dsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW 249
           ++ +s  f+++ + l+ ++  ++++lw++ +++c +t+ +h++ v  ++ sp +  ++s+s+D s++iW
   Q: 711  SQFHSCVFHPSYPTLLVIGGIRSLELWNMAENKC-MTVPAHESIVAALAQSPVNGMVASASHDSSVKIW 778
           *****************************99986.79******************************** PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MAQSNWEADK MLDVYIHDYL LKRKLHASAK AFMTEGKVAT DPVAIDAPGG FLFEWWSVFW 60
DIFIARTNDK HSEAAAAYIE AQQMKAREQQ QQQQLQMQQL QFMQHRTAQL QRRDPNHPPL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTTCCTCCA ATTGTTGTGC AAACCAAAGC ATGGCACAGA GTAATTGGGA AGCTGATAAA 60
ATGTATGTGC TGTTCCAATA TTTTTTCTAT GTTCAATTGA TTATTTCCTT CTTCTGATTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

KEGG

vvi:100255105

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000776	Aegilops tauschii	64.14	2.00e-148	519.00
IUUC-Atr-002717	Amborella trichopoda	62.99	0.00e+00	941.00
IUUC-Aly-006471	Arabidopsis lyrata	64.91	0.00e+00	907.00
IUUC-Ath-007671	Arabidopsis thaliana	63.51	0.00e+00	910.00
IUUC-Bdi-014855	Brachypodium distachyon	64.85	0.00e+00	951.00
IUUC-Bol-016419	Brassica oleracea	62.41	0.00e+00	913.00
IUUC-Bra-017537	Brassica rapa	60.84	0.00e+00	892.00
IUUC-Gma-044268	Glycine max	69.90	0.00e+00	1009.00
IUUC-Hvu-047358	Hordeum vulgare	64.65	8.00e-157	545.00
IUUC-Lpe-051527	Leersia perrieri	64.83	0.00e+00	942.00
IUUC-Mtr-058727	Medicago truncatula	73.95	0.00e+00	1061.00
IUUC-Mac-064608	Musa acuminata	65.29	0.00e+00	945.00
IUUC-Oba-075243	Oryza barthii	63.34	0.00e+00	920.00
IUUC-Obr-076847	Oryza brachyantha	64.71	0.00e+00	920.00
IUUC-Ogl-076931	Oryza glaberrima	65.02	0.00e+00	971.00
IUUC-Ogu-077963	Oryza glumaepatula	63.32	0.00e+00	914.00
IUUC-Oin-079144	Oryza indica	64.65	0.00e+00	961.00
IUUC-Olo-080947	Oryza longistaminata	61.45	0.00e+00	871.00
IUUC-Ome-081723	Oryza meridionalis	62.87	0.00e+00	914.00
IUUC-Oni-083067	Oryza nivara	64.77	0.00e+00	965.00
IUUC-Opu-083429	Oryza punctata	65.06	0.00e+00	971.00
IUUC-Oru-084534	Oryza rufipogon	63.72	0.00e+00	916.00
IUUC-Osa-085788	Oryza sativa	64.89	0.00e+00	968.00
IUUC-Pop-099999	Populus trichocarpa	78.32	0.00e+00	1156.00
IUUC-Ppe-101584	Prunus persica	81.53	0.00e+00	1169.00
IUUC-Smo-109593	Selaginella moellendorffii	48.62	0.00e+00	662.00
IUUC-Sit-110618	Setaria italica	64.98	0.00e+00	952.00
IUUC-Sly-111127	Solanum lycopersicum	76.65	0.00e+00	1117.00
IUUC-Stu-112404	Solanum tuberosum	77.92	0.00e+00	1116.00
IUUC-Sbi-114046	Sorghum bicolor	65.31	0.00e+00	966.00
IUUC-Tca-121725	Theobroma cacao	76.99	0.00e+00	1096.00
IUUC-Tae-125446	Triticum aestivum	64.22	0.00e+00	951.00
IUUC-Tur-126636	Triticum urartu	62.39	0.00e+00	839.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence