iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111025

Ensembl Protein ID

Solyc06g072830.2.1

UniProt Accession

K4C903; K4C903_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc06g072830.2	Solyc06g072830.2.1	Solyc06g072830.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/APC_C/CDC20	3.40e-123	411.5	128	434
E3 adaptor/Cullin RING/DCX/DWD	9.00e-26	89.6	312	351

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/APC_C/CDC20

   S: 2    ekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladl.eekdlvtsvswieegtllavGtkkgeveiyDveekkkvrt 91
           e+ ldap+l dd+ylnLldW+s+nvl++aLgs+vylw+a++g+ s+l  + ee+  vtsv+w ++g ++a+G +++ v+++D+++++ +rt
   Q: 128  ERTLDAPDLVDDYYLNLLDWGSSNVLSIALGSTVYLWDASDGATSELVTVdEEHGPVTSVKWAPDGRHIALGLNNSDVQLWDTTANRLLRT 218
           689***********************************************888899*********************************** PP
   S: 92   l.tghsarvgaLsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLasGGnDnsvsvwdassse......Plkkf 175
           +  gh +rvgaL+Wn+++l++G+ dg+i  +dvrv+   ++t+q+h+qevCGlkw+ ++++LasGGnDn +++wd s  +       l++ 
   Q: 219  MrGGHRSRVGALDWNNHLLTTGGMDGQIRNNDVRVRSPIVDTYQGHNQEVCGLKWSASGQQLASGGNDNLLHIWDRSMASsntsteWLHRL 309
           *889***********************************************************************8766555666689999 PP
   S: 176  kehkaavkaiawsPwqkslLasGGGtaDrcikfwntltgalleeidtgsqvcsllwskkskelvsthGfaenkitlwkypslskvaelkgh 266
           ++h+aavka+aw+P+q +lLasGGG  Dr ikfwnt tga+l++idtgsqvc llw k+++el+s+hGf++n++tlwkyps+ k ael+gh
   Q: 310  EDHTAAVKALAWCPFQGNLLASGGGGGDRSIKFWNTHTGACLNSIDTGSQVCALLWNKNERELLSSHGFTKNQLTLWKYPSMVKTAELTGH 400
           ******************************************************************************************* PP
   S: 267  eaRvlslalspdgeaivtaagDetlrfwklfdkk 300
           ++Rvl +a spdg ++++aagDetlrfw++f + 
   Q: 401  TSRVLFMAQSPDGCTVASAAGDETLRFWNVFGTP 434
           *******************************875 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGs..dDgtikvWDlrtgvll 36
           Ht+ v +la+   +++ll+sG+  +D +ik W+++tg +l
   Q: 312  HTAAVKALAWcpfQGNLLASGGggGDRSIKFWNTHTGACL 351
           9**********98669****5555*************997 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MDAGSLSSVS ASKNKSRCPL QEQYLQKRNS RDNLDRFIPN RSAMDMDYAH YMLTEGRKGK 60
ENPAVDSPSR EAYRKQLAET FNMNRSRILA FKNKPPTSVE GIPNDFSSSV HQQAKTAKPR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAATCATTAT CTTTGTTTGC AGGACACAAC TCGGGTCCTC TATCTTCTTC TTCTCTCTCT 60
TCTCAAGCAA ATCCGCAACG CGCACTTCCA TTTTACTTGC TTTAATTTGT TCTTCAGTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

KEGG

sly:101261334

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001545	Ailuropoda melanoleuca	44.83	4.00e-102	364.00
IUUC-Aca-004920	Anolis carolinensis	45.20	6.00e-103	367.00
IUUC-Cin-025675	Ciona intestinalis	48.41	3.00e-109	388.00
IUUC-Csv-026019	Ciona savignyi	46.78	2.00e-98	352.00
IUUC-Cme-027234	Cyanidioschyzon merolae	45.23	1.00e-101	363.00
IUUC-Fal-037558	Ficedula albicollis	44.93	1.00e-105	376.00
IUUC-Gmo-039284	Gadus morhua	43.61	4.00e-100	357.00
IUUC-Gga-040790	Gallus gallus	45.60	1.00e-108	385.00
IUUC-Gac-041431	Gasterosteus aculeatus	41.95	4.00e-96	344.00
IUUC-Lch-050174	Latimeria chalumnae	40.80	6.00e-85	307.00
IUUC-Loc-052638	Lepisosteus oculatus	40.96	2.00e-87	315.00
IUUC-Mga-060102	Meleagris gallopavo	45.60	1.00e-108	386.00
IUUC-Mdo-061982	Monodelphis domestica	42.32	8.00e-84	305.00
IUUC-Mpu-066502	Mustela putorius furo	45.70	2.00e-104	372.00
IUUC-Ont-071660	Oreochromis niloticus	45.37	6.00e-97	347.00
IUUC-Ola-086907	Oryzias latipes	45.70	9.00e-97	346.00
IUUC-Psi-093188	Pelodiscus sinensis	43.59	1.00e-105	375.00
IUUC-Pma-094187	Petromyzon marinus	46.00	1.00e-99	356.00
IUUC-Pop-098890	Populus trichocarpa	82.24	0.00e+00	760.00
IUUC-Sja-107919	Schizosaccharomyces japonicus	47.80	1.00e-92	332.00
IUUC-Sit-110032	Setaria italica	74.06	0.00e+00	660.00
IUUC-Stu-112676	Solanum tuberosum	98.02	0.00e+00	877.00
IUUC-Tgu-117100	Taeniopygia guttata	46.04	7.00e-106	377.00
IUUC-Tni-120474	Tetraodon nigroviridis	44.33	1.00e-93	336.00
IUUC-Ttr-128511	Tursiops truncatus	45.43	7.00e-102	363.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence