iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-108900

Ensembl Protein ID

EFJ10270

UniProt Accession

D8SZF0; D8SZF0_SELML

Genbank Protein ID

EFJ10270.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377655

Gene Name

SELMODRAFT_128484

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_128484	EFJ10270	EFJ10270

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.50e-19	68.2	142	176

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvll 36
           gHt  v ++a+ s   l +G+ D+++kvW+ ++g+++
   Q: 142  GHTKAVKGIALsS--SLYTGGQDKSVKVWNSDDGKCT 176
           8**********53..7******************997 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MEVDDGPARV GGKRHISSHR IPQVCRYWQE GRCNKGDSCQ WLHSSGPGTS GRLDGDNFLV 60
GSKRHNNVVE GRRWGKPRGR RGGGGGGGGG GRGIFTDGGR PRPRDKPCIF WMKGDCNRGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGTGG ACGACGGCCC CGCTAGGGTT GGCGGCAAGC GCCACATTTC CAGCCATCGC 60
ATCCCCCAGG TGTGTAGATA CTGGCAAGAA GGCCGATGCA ACAAGGGCGA TAGCTGCCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0853--WD repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR000571--Znf_CCCH

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS50103--ZF_C3H1

Pfam

PF00400--WD40
PF00642--zf-CCCH

SMART

SM00320--WD40
SM00356--ZnF_C3H1

Gene Ontology

GO:0046872--F:metal ion binding

KEGG

smo:SELMODRAFT_128484

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002831	Amborella trichopoda	46.74	3.00e-102	364.00
IUUC-Bdi-014857	Brachypodium distachyon	48.57	7.00e-103	366.00
IUUC-Bra-017351	Brassica rapa	46.68	1.00e-103	369.00
IUUC-Gma-042894	Glycine max	46.85	5.00e-95	340.00
IUUC-Hvu-047824	Hordeum vulgare	47.13	1.00e-75	276.00
IUUC-Lpe-051596	Leersia perrieri	41.99	5.00e-80	290.00
IUUC-Oba-075769	Oryza barthii	42.37	4.00e-79	287.00
IUUC-Obr-076011	Oryza brachyantha	49.27	7.00e-102	363.00
IUUC-Ogu-078248	Oryza glumaepatula	41.89	2.00e-79	288.00
IUUC-Oin-079981	Oryza indica	48.43	4.00e-101	360.00
IUUC-Olo-080571	Oryza longistaminata	42.13	4.00e-73	267.00
IUUC-Ome-081598	Oryza meridionalis	42.13	1.00e-79	289.00
IUUC-Oni-082711	Oryza nivara	42.13	1.00e-79	289.00
IUUC-Opu-083451	Oryza punctata	47.25	2.00e-99	354.00
IUUC-Oru-085129	Oryza rufipogon	41.85	5.00e-78	283.00
IUUC-Osa-085619	Oryza sativa	44.84	6.00e-68	249.00
IUUC-Ppa-096012	Physcomitrella patens	50.10	1.00e-123	435.00
IUUC-Ppe-101609	Prunus persica	46.43	1.00e-102	365.00
IUUC-Sit-109731	Setaria italica	48.08	3.00e-100	357.00
IUUC-Sly-111514	Solanum lycopersicum	45.47	1.00e-92	332.00
IUUC-Stu-112646	Solanum tuberosum	47.15	3.00e-97	347.00
IUUC-Sbi-114748	Sorghum bicolor	50.48	1.00e-104	372.00
IUUC-Tca-121658	Theobroma cacao	42.37	8.00e-92	330.00
IUUC-Tae-125577	Triticum aestivum	49.41	5.00e-103	367.00
IUUC-Tur-126095	Triticum urartu	43.54	4.00e-53	202.00
IUUC-Vvi-131444	Vitis vinifera	46.43	4.00e-101	360.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence