iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131173

UUCD1 version

UUC-ViV-00618

Ensembl Protein ID

VIT_06s0009g00320.t01

UniProt Accession

F6HAE5; F6HAE5_VITVI

Genbank Protein ID

CCB49207.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

FN595504

Gene Name

VIT_06s0009g00320

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_06s0009g00320	VIT_06s0009g00320.t01	VIT_06s0009g00320.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.10e-33	115.7	5	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqplteedlvPnltlrrliqawceens 73
           +vp++f+CpIsl+lMrdPv++++Gitydr++Ie+wl s+++ tcP+t+q l ++dl+Pn+tlrrliqawc  n+
   Q: 5    DVPSHFMCPISLQLMRDPVTVATGITYDRENIERWLFSCKNnTCPFTKQVLVDTDLTPNHTLRRLIQAWCIVNA 78
           69**********************************998888****************************7765 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MDEIDVPSHF MCPISLQLMR DPVTVATGIT YDRENIERWL FSCKNNTCPF TKQVLVDTDL 60
TPNHTLRRLI QAWCIVNACH GVERIPTPKP PIDKAQIIKL LNDAIKFPQM QLKCLQRLRS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATATAGTTT TCTATATCGA ATGGATGAAA TCGATGTTCC TTCTCATTTT ATGTGCCCAA 60
TTTCCCTGCA ACTCATGAGA GATCCAGTCA CGGTTGCAAC TGGGATCACA TACGATCGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

vvi:100254792

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-043606	Glycine max	67.80	4.00e-160	556.00
IUUC-Lpe-051695	Leersia perrieri	41.88	6.00e-74	270.00
IUUC-Mtr-057893	Medicago truncatula	66.11	2.00e-146	510.00
IUUC-Obr-076623	Oryza brachyantha	43.82	7.00e-55	206.00
IUUC-Pop-099941	Populus trichocarpa	71.08	2.00e-178	617.00
IUUC-Ppe-101254	Prunus persica	66.75	1.00e-158	551.00
IUUC-Sit-110734	Setaria italica	48.10	8.00e-94	336.00
IUUC-Sly-111427	Solanum lycopersicum	63.87	2.00e-157	547.00
IUUC-Stu-112639	Solanum tuberosum	59.25	1.00e-154	538.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence