iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095765

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S200_26V6	PP1S200_26V6.1	PP1S200_26V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-27	95.6	155	190
UBD/Beta-Prp	1.80e-41	143.1	154	366

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sdtllvsGsdDgtikvWDlrtgvllk 37
           H+ds++cla  + + l sGs+D+++kvW+l+++++l 
   Q: 155  HNDSISCLAVgN-GVLYSGSWDKSVKVWRLSDFKCLE 190
           *********955.99*******************986 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw...dlstgkcvhtlk...gheds 96
           +h + i+c+++  ++ +l +gs+d+++kvw++++ k+l+sl gh ++v+a+  +++ ++l tgs D t+kv+   dl + k  h+l    + ++ 
   Q: 154  NHNDSISCLAV--GNGVLYSGSWDKSVKVWRLSDFKCLESLCGHIDAVNALAVDKQHDLLYTGSGDTTVKVYqrqDLGNKKSQHVLVatlEVKSP 246
           79999******..***********************************************************98877766666655544479999 PP
   S: 97   vlslsfspsgdklvsGshdrtirvwdletgqclee.....tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl...ktgkllrtltgghtdsv 183
           v +l++sp+g  l ++ +d+t+ +w++++    ++     tl+gh+ ++ c+++++  nl+++Gs+D+tvr+W+       ++l  + g ht++v
   Q: 247  VNALALSPEGALLYTAQSDKTVTIWKMKEIDGDRQwtavgTLRGHRLAILCLTIMS--NLVITGSADTTVRVWRRdaeDVHTCLSVMVG-HTGPV 338
           ***************************9988777788889****************..***************9966666778888898.***** PP
   S: 184  yslsfdsng...kelvsgsldgtvklwd 208
           +sl + s++     + sgs+dg++++w 
   Q: 339  KSLCVLSDMamgALVYSGSMDGDIRVWW 366
           ****9999888899*************6 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MGVRLMGQDS LDSEASTSSS LVSSRSCTNG RGPHKCIAIL HGQALHVITL ALSGDVLYAG 60
SNHGDIRAWD HPDMQEATKF GSGRAAVKCI VVVGNRVISA HQDHKIRVWR RSKCQPQEYR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATCCACGCC TCGCATGTCG CGCTCGACGG CTTCCTCCTG AGATTTCGAT CTGTAAGTGC 60
GTATCCGACG ACACATTTTC TGTCTCGCAG CCCTCAGTCC GATCTGGAAT CGATCGGGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-015680	Brassica oleracea	41.69	1.00e-72	266.00
IUUC-Bra-018099	Brassica rapa	44.19	2.00e-76	278.00
IUUC-Gma-043773	Glycine max	44.10	4.00e-75	274.00
IUUC-Mac-064538	Musa acuminata	41.50	1.00e-68	253.00
IUUC-Olo-080540	Oryza longistaminata	35.52	3.00e-46	178.00
IUUC-Ome-081447	Oryza meridionalis	40.58	2.00e-59	223.00
IUUC-Opu-083126	Oryza punctata	41.44	4.00e-59	221.00
IUUC-Ppe-101355	Prunus persica	44.91	9.00e-74	270.00
IUUC-Sit-109950	Setaria italica	39.61	2.00e-56	212.00
IUUC-Sly-111222	Solanum lycopersicum	39.30	1.00e-71	262.00
IUUC-Stu-112315	Solanum tuberosum	41.64	5.00e-76	277.00
IUUC-Tae-123427	Triticum aestivum	41.36	2.00e-67	248.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence