iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043053

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000846

Gene Name

LOC100812591; GLYMA_13G050800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA13G06960	GLYMA13G06960.1	GLYMA13G06960.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.90e-08	34.3	301	342

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC+++   ++ ++ lpC H++h dC+  w         + +CP+Cr
   Q: 301  CAICKDEVllEEKVRRLPCSHCYHGDCILPW------LGIRNTCPVCR 342
           ******8888666******************......**********8 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MSNHHRSSNP FSSTHSDSDS DSVSCFVTDL FETRSRLCSC DDDTDINPFS DVVCDLHRTE 60
HMLGLGLGFG VEIDPESQTN DRDNHRGDRV LEADRVFNFT VGDGSGGLRV VGFGSESESS 120

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Nucleotide Sequence
(Fasta)

AGAAATTATA GTCAACCATT GTTCTGTTTC ACCAATCTTA CGTAACATTT CCTTCCCCAA 60
CTTTGCACTC TCGAATCCCC TCGGCGACTC TTCGAAGTCT CTGTCACCAA AAACAACGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

gmx:100812037

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005543	Arabidopsis lyrata	46.86	3.00e-40	159.00
IUUC-Ath-006960	Arabidopsis thaliana	49.39	5.00e-40	158.00
IUUC-Bol-015267	Brassica oleracea	43.11	2.00e-31	129.00
IUUC-Ncr-068908	Neurospora crassa	39.25	1.00e-18	87.80
IUUC-Oba-075271	Oryza barthii	50.00	4.00e-25	108.00
IUUC-Ogl-077383	Oryza glaberrima	50.00	4.00e-25	108.00
IUUC-Oin-079119	Oryza indica	50.00	4.00e-25	108.00
IUUC-Ome-081782	Oryza meridionalis	45.40	1.00e-28	120.00
IUUC-Sit-110400	Setaria italica	38.89	4.00e-30	125.00
IUUC-Sly-110977	Solanum lycopersicum	55.76	3.00e-46	179.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence