iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016747

Ensembl Protein ID

Bra019048.1-P

UniProt Accession

M4DRA5; M4DRA5_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra019048	Bra019048.1	Bra019048.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.10e-07	30.7	40	89

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw.....pglknssskefrCPlCr 46
           C iCl+   d p+v+ CgH+f+  C++kw       l+    ++ +CP+C+
   Q: 40   CNICLDTALD-PVVTLCGHLFCWPCIYKWlhvqlSSLSTDHHRRNNCPVCK 89
           99******9*.99999*************99555333333444556****6 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MEGSFLISDA QQAHEEVKQK PNLITGPAGS QANESGCFDC NICLDTALDP VVTLCGHLFC 60
WPCIYKWLHV QLSSLSTDHH RRNNCPVCKS NIAITSLVPL YGRGMSSSVN SKEQDSESTV 120

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Nucleotide Sequence
(Fasta)

ATGGAAGGAA GCTTCCTCAT CTCTGATGCT CAACAAGCAC ATGAAGAAGT CAAACAAAAA 60
CCTAATCTCA TCACGGGTCC AGCAGGATCC CAAGCTAACG AAAGTGGCTG TTTTGATTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014665	Brachypodium distachyon	53.54	4.00e-26	110.00
IUUC-Lpe-051642	Leersia perrieri	52.08	1.00e-24	106.00
IUUC-Oba-075301	Oryza barthii	50.53	4.00e-21	94.70
IUUC-Pno-094942	Phaeosphaeria nodorum	27.35	2.00e-09	56.20
IUUC-Pop-099944	Populus trichocarpa	45.78	6.00e-50	190.00
IUUC-Sit-110015	Setaria italica	49.51	2.00e-25	108.00
IUUC-Sly-111102	Solanum lycopersicum	43.40	5.00e-39	153.00
IUUC-Stu-112640	Solanum tuberosum	40.71	3.00e-41	161.00
IUUC-Tur-126644	Triticum urartu	55.45	1.00e-26	113.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence