iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058469

Ensembl Protein ID

KEH39118

UniProt Accession

A0A072VCD2; A0A072VCD2_MEDTR

Genbank Protein ID

KEH39118.1

Protein Name

E3 ubiquitin-protein ligase RMA1H1-like protein

Genbank Nucleotide ID

CM001218

Gene Name

MTR_2g090295

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_2g090295	KEH39118	KEH39118

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.50e-08	34.0	40	101
E3 activity/RING/RING	2.70e-07	32.4	42	90

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 6    flCpIslelMrdPvvlpsGitydrssIekwl......asggk......tcPvtrqplteedlvPn 58
           f C I le  +dPvv+ +G+ y   +I kwl      +   +      +cPv+++++++++lvP 
   Q: 40   FDCNICLECVQDPVVTLCGHLYCWPCIYKWLnfhaenQ---EkqkeepQCPVCKSEISKSSLVPL 101
           99*****************************8775431...1467899***************96 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw......pglknssskefrCPlCr 46
           C iCle  +d p+v+ CgH+++  C++kw      ++ k  ++ e +CP+C+
   Q: 42   CNICLECVQD-PVVTLCGHLYCWPCIYKWlnfhaeNQEK--QKEEPQCPVCK 90
           99********.9999****************99776666..99999*****7 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MAFNQYFEEG MNQIDSLEEK SSQEMWKCAS AEAISGSSGF DCNICLECVQ DPVVTLCGHL 60
YCWPCIYKWL NFHAENQEKQ KEEPQCPVCK SEISKSSLVP LYGRGQTTPP SKGNDHQIGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTCTTCTTC TATAAAAACA ACAACAATAT CAGATTTTCT TCCTCCTCTT CTTCATTTCA 60
TTCCTTCCGC TCCGCTGCCA CCGATTTTGC TTTTCACACC TCTCTCTCTC TCTCTCTCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0016874--F:ligase activity
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_2g090295

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ppe-101414	Prunus persica	47.79	3.00e-59	220.00
IUUC-Sit-110015	Setaria italica	37.04	3.00e-27	114.00
IUUC-Sly-111102	Solanum lycopersicum	43.78	9.00e-47	179.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence