iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099047

UUCD1 version

UUC-PoT-00135

Ensembl Protein ID

POPTR_0005s11160.2

UniProt Accession

U5GEW8; U5GEW8_POPTR

Genbank Protein ID

ERP60855.1; ERP60856.1

Protein Name

F-box family protein

Genbank Nucleotide ID

CM000341; CM000341

Gene Name

POPTRDRAFT_593809; POPTR_0005s11160g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0005s11160	POPTR_0005s11160.2	POPTR_0005s11160.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	24.22	2.00e-09	62.00	IUUC-Hsa-046348

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MKLRLRSVQS KETVKIQVPD SCTLQQLKET LSRAISSSGS SLYLSLNRKD ELNTSLPEDS 60
LQSLGITSGD LIYFSVNPKD FSSSGQPLCL GSSSSIQEQV QGHRGNVEEP MPDQSMSFQE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTGAATCTT ATCTTCTAAG GATTGATTGA GAAAGAAGAA AGCAGCAGCA GCAGCAGAAG 60
CAGCAAAACT CTCTAAGAAA TTCTTGTCTG CCCACCCTCT AAACAACCCT CAAGGTCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR024682--Npl4_Ub-like_dom
IPR029071--Ubiquitin-rel_dom

PROSITE

PS50181--FBOX

Pfam

PF12937--F-box-like
PF11543--UN_NPL4

SMART

SM00256--FBOX

KEGG

pop:POPTR_0005s11160g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000290	Aegilops tauschii	29.30	4.00e-31	128.00
IUUC-Aml-001880	Ailuropoda melanoleuca	25.21	4.00e-08	52.40
IUUC-Atr-003003	Amborella trichopoda	37.21	2.00e-72	266.00
IUUC-Apl-003234	Anas platyrhynchos	25.73	3.00e-13	69.30
IUUC-Aca-004673	Anolis carolinensis	24.69	2.00e-06	47.00
IUUC-Ath-007055	Arabidopsis thaliana	37.05	7.00e-70	257.00
IUUC-Ago-007783	Ashbya gossypii	31.91	1.60e-02	34.30
IUUC-Ang-009828	Aspergillus niger	25.49	9.10e-01	27.30
IUUC-Ame-011867	Astyanax mexicanus	35.85	1.00e-05	44.30
IUUC-Bta-013386	Bos taurus	23.23	6.00e-08	51.60
IUUC-Bdi-014029	Brachypodium distachyon	26.68	7.00e-39	154.00
IUUC-Bol-015733	Brassica oleracea	38.05	6.00e-78	284.00
IUUC-Bra-016639	Brassica rapa	47.27	1.00e-60	226.00
IUUC-Cja-019301	Callithrix jacchus	26.02	1.00e-14	74.30
IUUC-Cfa-020474	Canis familiaris	25.42	4.00e-09	55.50
IUUC-Cpo-021958	Cavia porcellus	26.69	4.00e-13	68.90
IUUC-Csa-023971	Chlorocebus sabaeus	24.67	2.00e-11	63.90
IUUC-Cho-025085	Choloepus hoffmanni	39.47	4.00e-03	35.00
IUUC-Cin-025142	Ciona intestinalis	33.33	7.00e-04	37.00
IUUC-Cne-027052	Cryptococcus neoformans	30.23	2.90e-02	33.50
IUUC-Dre-028579	Danio rerio	36.00	3.00e-05	43.10
IUUC-Dno-029936	Dasypus novemcinctus	26.39	1.00e-13	70.90
IUUC-Dor-030716	Dipodomys ordii	26.97	8.00e-13	67.80
IUUC-Eca-034267	Equus caballus	24.46	1.00e-07	50.40
IUUC-Fca-035849	Felis catus	24.74	2.00e-08	53.50
IUUC-Fal-037612	Ficedula albicollis	23.85	1.00e-06	47.40
IUUC-Gga-041190	Gallus gallus	25.11	2.00e-07	50.10
IUUC-Gma-044390	Glycine max	42.74	8.00e-62	230.00
IUUC-Ggo-044544	Gorilla gorilla	25.09	8.00e-10	58.20
IUUC-Hsa-046348	Homo sapiens	24.91	1.00e-09	57.40
IUUC-Itr-048160	Ictidomys tridecemlineatus	25.75	4.00e-10	58.90
IUUC-Lpe-051370	Leersia perrieri	30.05	2.00e-18	87.40
IUUC-Loc-052230	Lepisosteus oculatus	33.96	5.00e-06	45.80
IUUC-Lma-052967	Leptosphaeria maculans	28.57	1.00e-03	37.70
IUUC-Laf-053445	Loxodonta africana	25.34	6.00e-03	35.40
IUUC-Meu-055942	Macropus eugenii	30.00	8.00e-07	47.80
IUUC-Mtr-058475	Medicago truncatula	40.84	6.00e-65	241.00
IUUC-Mga-059897	Meleagris gallopavo	25.12	1.00e-05	43.90
IUUC-Mmr-061491	Microcebus murinus	25.10	5.00e-09	55.50
IUUC-Mdo-062549	Monodelphis domestica	23.85	1.00e-09	57.80
IUUC-Mmu-064312	Mus musculus	26.03	6.00e-15	75.10
IUUC-Mac-064591	Musa acuminata	38.11	2.00e-38	153.00
IUUC-Mlu-067947	Myotis lucifugus	25.17	3.00e-09	56.20
IUUC-Ncr-068797	Neurospora crassa	28.81	1.10e-02	35.00
IUUC-Nle-069189	Nomascus leucogenys	24.21	2.00e-11	63.90
IUUC-Opr-070340	Ochotona princeps	30.28	7.00e-09	55.10
IUUC-Ont-071669	Oreochromis niloticus	37.74	7.00e-07	48.50
IUUC-Oan-073153	Ornithorhynchus anatinus	22.47	8.00e-07	47.80
IUUC-Ocu-074367	Oryctolagus cuniculus	27.11	5.00e-08	52.00
IUUC-Oba-075835	Oryza barthii	32.72	6.00e-33	134.00
IUUC-Obr-076729	Oryza brachyantha	29.91	7.00e-34	137.00
IUUC-Ogl-077760	Oryza glaberrima	36.36	2.00e-06	44.70
IUUC-Ogu-078908	Oryza glumaepatula	36.36	2.00e-06	44.70
IUUC-Oin-079955	Oryza indica	36.36	2.00e-06	44.70
IUUC-Ome-081758	Oryza meridionalis	32.00	5.00e-34	139.00
IUUC-Opu-083777	Oryza punctata	32.26	5.00e-32	132.00
IUUC-Oru-084872	Oryza rufipogon	33.74	3.00e-30	127.00
IUUC-Osa-086001	Oryza sativa	33.74	3.00e-30	125.00
IUUC-Oga-088097	Otolemur garnettii	25.00	2.00e-07	50.10
IUUC-Oar-089633	Ovis aries	24.83	2.00e-08	53.50
IUUC-Ptr-091253	Pan troglodytes	25.09	2.00e-10	60.10
IUUC-Pan-092709	Papio anubis	24.86	6.00e-11	62.00
IUUC-Pma-094225	Petromyzon marinus	23.67	3.00e-06	46.20
IUUC-Ppa-095848	Physcomitrella patens	29.98	6.00e-43	168.00
IUUC-Pab-098160	Pongo abelii	24.22	2.00e-08	53.90
IUUC-Ppe-101570	Prunus persica	42.38	3.00e-94	338.00
IUUC-Pva-103142	Pteropus vampyrus	24.58	5.00e-08	52.00
IUUC-Rno-105527	Rattus norvegicus	23.08	6.00e-09	55.10
IUUC-Sha-106501	Sarcophilus harrisii	23.85	6.00e-08	51.60
IUUC-Smo-108975	Selaginella moellendorffii	40.00	2.00e-30	124.00
IUUC-Sit-109751	Setaria italica	37.88	4.00e-07	46.60
IUUC-Sly-111386	Solanum lycopersicum	39.19	2.00e-76	279.00
IUUC-Stu-112530	Solanum tuberosum	38.76	8.00e-79	287.00
IUUC-Sar-113529	Sorex araneus	29.82	1.00e-08	53.90
IUUC-Sbi-114203	Sorghum bicolor	32.92	1.00e-32	134.00
IUUC-Ssc-116130	Sus scrofa	24.45	1.00e-10	61.20
IUUC-Tru-117759	Takifugu rubripes	23.64	1.00e-02	34.30
IUUC-Tni-120516	Tetraodon nigroviridis	37.04	3.00e-06	46.20
IUUC-Tca-120980	Theobroma cacao	56.58	2.00e-110	391.00
IUUC-Tae-123742	Triticum aestivum	30.63	9.00e-28	117.00
IUUC-Tbe-127805	Tupaia belangeri	25.51	9.00e-08	51.20
IUUC-Ttr-129004	Tursiops truncatus	30.77	9.00e-07	47.80
IUUC-Uma-129621	Ustilago maydis	39.13	1.00e-04	41.20
IUUC-Vpa-130452	Vicugna pacos	24.92	1.00e-08	54.30
IUUC-Vvi-131289	Vitis vinifera	47.92	6.00e-127	447.00
IUUC-Xtr-132447	Xenopus tropicalis	26.53	3.00e-07	49.70
IUUC-Xma-133309	Xiphophorus maculatus	29.33	1.40e+00	27.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence