iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sit-110139

Ensembl Protein ID

Si019055m

UniProt Accession

K3YXQ9; K3YXQ9_SETIT

Genbank Protein ID

KQL27889.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM003528

Gene Name

LOC101779502; SETIT_019055mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Si019055m.g	Si019055m	Si019055m

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.10e-09	37.2	110	152

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl   +dg  +++lp CgH+fh +C+  w       + +++CPlCr
   Q: 110  CAICLAVVRDGetVRLLPaCGHLFHVECIDLW------LRSHATCPLCR 152
           ****998855555*******************......**********8 PP

Organism

Setaria italica

Protein Sequence
(Fasta)

MSSYGYGPTA ATADALEVAA AGGSYRVCDT VVLVCLACAS GLIVLTVAVC FRRAFAHGYA 60
AAAVGGNGAG PAAAASGRNR CGLPPSALSA IPMLAYRRGA AGAGAGWAQC AICLAVVRDG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGTCGT ACGGGTACGG CCCCACCGCC GCCACGGCGG ACGCGTTGGA AGTTGCCGCC 60
GCCGGCGGCA GCTACCGTGT GTGCGACACG GTGGTGCTCG TCTGCCTCGC CTGCGCATCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

sita:106804402

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014083	Brachypodium distachyon	67.94	8.00e-27	112.00
IUUC-Cin-025662	Ciona intestinalis	44.16	2.00e-10	59.30
IUUC-Lpe-051720	Leersia perrieri	64.81	2.00e-37	147.00
IUUC-Oin-079132	Oryza indica	63.52	1.00e-37	147.00
IUUC-Ome-081292	Oryza meridionalis	64.85	4.00e-40	156.00
IUUC-Oni-083051	Oryza nivara	63.52	1.00e-37	147.00
IUUC-Oru-084345	Oryza rufipogon	65.22	3.00e-39	153.00
IUUC-Osa-085570	Oryza sativa	65.22	3.00e-39	153.00
IUUC-Sbi-114014	Sorghum bicolor	75.95	1.00e-35	141.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence