iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114629

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000765

Gene Name

SORBI_006G274900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb06g033630	Sb06g033630.1	Sb06g033630.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.00e-30	105.5	12	84

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpl.teedlvPnltlrrliqawceens 73
           evp +flCpIsl +MrdPv+lp+Gitydr  Ie+wl +  + cP+t+qp+ ++ d +Pn+tlrrliq+wc+ ++
   Q: 12   EVPCYFLCPISLSIMRDPVTLPTGITYDRDGIERWLLTAAT-CPLTKQPVpADCDPTPNHTLRRLIQSWCALHA 84
           6899*********************************9998.********778888**************9876 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MEEEPQPQVE VEVPCYFLCP ISLSIMRDPV TLPTGITYDR DGIERWLLTA ATCPLTKQPV 60
PADCDPTPNH TLRRLIQSWC ALHAADGVDR VHTPKPRADV AALVSRLHDA AAAGSTAPQP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATAAAGACA ACACCACACC ATTGTAGCCA GCTTCGGCCG GTCTGCCTAC TCTCCAACAC 60
CACACCATTG TAGCAACAAG AAGAAGAAGA AGACAGCCAA CACGTACGCC ATTGCTTGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sbi:SORBI_06g033630

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Lpe-050796	Leersia perrieri	58.51	6.00e-90	323.00
IUUC-Oba-075095	Oryza barthii	71.91	2.00e-117	415.00
IUUC-Obr-076623	Oryza brachyantha	66.15	2.00e-77	281.00
IUUC-Ogl-077664	Oryza glaberrima	71.57	4.00e-119	420.00
IUUC-Ogu-078137	Oryza glumaepatula	69.01	5.00e-116	410.00
IUUC-Oin-079766	Oryza indica	65.43	3.00e-70	258.00
IUUC-Ome-081839	Oryza meridionalis	73.13	2.00e-136	477.00
IUUC-Oni-082645	Oryza nivara	69.01	5.00e-116	410.00
IUUC-Opu-084067	Oryza punctata	70.17	4.00e-136	476.00
IUUC-Oru-084231	Oryza rufipogon	68.77	1.00e-115	408.00
IUUC-Osa-086055	Oryza sativa	68.77	1.00e-115	408.00
IUUC-Sit-110366	Setaria italica	76.01	8.00e-143	499.00
IUUC-Tae-123477	Triticum aestivum	59.77	2.00e-86	311.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence