iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114095

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G476900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g044680	Sb01g044680.1	Sb01g044680.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.20e-11	43.3	114	161

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg....plvlp....CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCledf+d     pl+l+    C Hvfh++C+ kw       + ++ CP+Cr
   Q: 114  CAICLEDFDDAaaadPLSLRampsCSHVFHKHCILKW------LRLNAVCPVCR 161
           ********6644444666666669*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MEEARVGENW GFGNLGGRTY TIRRQRQRTP PPPPSPGLED PEPHPDGSEE GESSSGEGEF 60
QGPVNIRAYG AALWALLQQQ GKRGRVTASS DADILRLLHE VTPAGSGCCS SDCCAICLED 120

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Nucleotide Sequence
(Fasta)

ATGGAAGAGG CACGAGTCGG TGAAAATTGG GGATTTGGGA ATCTTGGTGG CCGGACATAC 60
ACCATCAGGC GGCAGCGGCA GCGCACTCCT CCTCCTCCGC CTTCTCCTGG CTTGGAGGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_01g044680

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Sit-110233	Setaria italica	50.00	2.00e-20	90.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence