iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076642

Ensembl Protein ID

OB09G24560.1

UniProt Accession

J3MZM7; J3MZM7_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB09G24560	OB09G24560.1	OB09G24560.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.30e-37	124.5	213	250

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtgvl 35
           gH d v ++a+   +d+l+ s +dD+++++WDlrt+++
   Q: 213  GHDDVVEDVAWhlkDDNLFGSVGDDCKLMMWDLRTNKP 250
           8************766*******************987 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MDGGSSSPAR PPRAGSSATE MEEYQNWKKN APVLYDLVIS QPLEWPSLTV QCFPSSQSPE 60
STRSHRLVLG THTSDGSLNH LMLADAVLPL PPRLAAAAAA AGGAVPAPSV SISRSVPHKG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGGCG GCTCCTCCTC GCCGGCGAGG CCTCCAAGGG CCGGGTCGTC CGCGACGGAG 60
ATGGAGGAGT ACCAGAACTG GAAAAAGAAC GCGCCGGTGC TCTACGACCT CGTCATCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

obr:102705279

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000234	Aegilops tauschii	79.63	2.00e-125	441.00
IUUC-Bdi-014769	Brachypodium distachyon	82.68	0.00e+00	633.00
IUUC-Gma-043256	Glycine max	57.26	7.00e-113	399.00
IUUC-Lpe-051076	Leersia perrieri	78.22	0.00e+00	647.00
IUUC-Mac-065473	Musa acuminata	63.76	1.00e-126	445.00
IUUC-Oba-075939	Oryza barthii	86.21	2.00e-175	607.00
IUUC-Ogl-077012	Oryza glaberrima	93.16	0.00e+00	630.00
IUUC-Ogu-078437	Oryza glumaepatula	94.16	0.00e+00	635.00
IUUC-Oin-079872	Oryza indica	92.17	0.00e+00	637.00
IUUC-Olo-080709	Oryza longistaminata	96.27	3.00e-146	509.00
IUUC-Ome-081189	Oryza meridionalis	93.83	3.00e-180	623.00
IUUC-Oni-082852	Oryza nivara	93.90	0.00e+00	637.00
IUUC-Opu-083343	Oryza punctata	94.16	1.00e-178	618.00
IUUC-Oru-084993	Oryza rufipogon	92.42	0.00e+00	639.00
IUUC-Osa-086061	Oryza sativa	91.48	0.00e+00	632.00
IUUC-Sit-109983	Setaria italica	82.12	4.00e-171	593.00
IUUC-Sbi-114183	Sorghum bicolor	82.64	2.00e-169	587.00
IUUC-Tae-125023	Triticum aestivum	82.44	2.00e-177	613.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence