iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016240

Ensembl Protein ID

Bo6g119980.1

UniProt Accession

A0A0D3D103; A0A0D3D103_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo6g119980	Bo6g119980.1	Bo6g119980.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/SKP1	1.20e-30	106.9	112	159

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/SKP1

   S: 1    ksLLdltcktVadmikgktpeeiRktFnienDftpeEeakvReEnqWA 48
           k+LLdltc+tVadmikgktp+eiR+tFni+nDf+peEe++vR+EnqWA
   Q: 112  KNLLDLTCQTVADMIKGKTPDEIRTTFNIKNDFSPEEEEEVRRENQWA 159
           79*********************************************9 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MSTKKIVLKS SDNESFEVDE AVARESQTLA HMVEDDCTDN GIPLPNVTGK ILAKVIEYCK 60
KHVDAAAAKT EAAADGGASS DDDLKAWDAE FMKIDQATLF ELILAANYLN IKNLLDLTCQ 120

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Nucleotide Sequence
(Fasta)

ATGTCGACGA AGAAGATTGT GTTGAAGAGC TCCGACAACG AGTCTTTCGA GGTTGACGAG 60
GCCGTGGCTC GCGAGTCTCA GACCCTGGCT CACATGGTCG AAGACGACTG CACCGACAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR016897--SKP1
IPR001232--SKP1-like
IPR011333--SKP1/BTB/POZ
IPR016072--Skp1_comp_dimer
IPR016073--Skp1_comp_POZ

Pfam

PF01466--Skp1
PF03931--Skp1_POZ

SMART

SM00512--Skp1

Gene Ontology

GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bra-016677	Brassica rapa	96.27	6.00e-72	262.00
IUUC-Pno-094810	Phaeosphaeria nodorum	46.53	4.00e-30	123.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence