iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099187

UUCD1 version

UUC-PoT-00009

Ensembl Protein ID

POPTR_0005s26450.1

UniProt Accession

A9PGQ1; A9PGQ1_POPTR

Genbank Protein ID

ABK95554.1; EEE93946.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

EF147541; CM000341

Gene Name

POPTRDRAFT_818827; POPTR_0005s26450g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0005s26450	POPTR_0005s26450.1	POPTR_0005s26450.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/SKP1	1.00e-30	106.7	108	155

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/SKP1

   S: 1    ksLLdltcktVadmikgktpeeiRktFnienDftpeEeakvReEnqWA 48
           k+LLdltc+ VadmikgktpeeiRktFni+nDftpeEe++vR+EnqWA
   Q: 108  KNLLDLTCQRVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWA 155
           79*********************************************9 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSTGRKFILK SSDGESFEVD EAVAVESQTI KHMIEDDCAD NGIPLPNVTS KVLAKVIEYC 60
KKHVESPKSD DRPSSAADDL KAWDAEFVKV DQATLFDLIL AANYLNIKNL LDLTCQRVAD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATAAAAAATC TTCTGCTTCC TCGAGAAGGC TAACAATAAT TTCTTGTCGC TGTAGCTTCT 60
ATTTTCTCTC AATCAAAGAG CAAAATAATG TCGACGGGCC GGAAATTTAT TCTGAAAAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR016897--SKP1
IPR001232--SKP1-like
IPR011333--SKP1/BTB/POZ
IPR016072--Skp1_comp_dimer
IPR016073--Skp1_comp_POZ

Pfam

PF01466--Skp1
PF03931--Skp1_POZ

SMART

SM00512--Skp1

Gene Ontology

GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0005s26450g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000311	Aegilops tauschii	74.39	2.00e-61	227.00
IUUC-Ate-010375	Aspergillus terreus	54.94	1.00e-39	154.00
IUUC-Bol-015842	Brassica oleracea	81.37	1.00e-67	248.00
IUUC-Bra-017304	Brassica rapa	81.99	1.00e-67	248.00
IUUC-Cho-024854	Choloepus hoffmanni	42.86	4.00e-11	59.30
IUUC-Cme-027174	Cyanidioschyzon merolae	49.35	5.00e-37	146.00
IUUC-Gma-042996	Glycine max	86.62	1.00e-64	238.00
IUUC-Obr-076218	Oryza brachyantha	82.69	1.00e-59	222.00
IUUC-Ssl-108591	Sclerotinia sclerotiorum	51.35	1.00e-34	138.00
IUUC-Sit-110435	Setaria italica	70.12	1.00e-54	204.00
IUUC-Tca-121022	Theobroma cacao	89.10	4.00e-73	265.00
IUUC-Tae-123081	Triticum aestivum	75.00	3.00e-62	229.00
IUUC-Tur-126200	Triticum urartu	80.00	1.00e-62	231.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence