iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000565

Ensembl Protein ID

EMT24067

UniProt Accession

M8CAF8; M8CAF8_AEGTA

Genbank Protein ID

EMT24067.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KD518583

Gene Name

F775_25939

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_25939	EMT24067	EMT24067

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.20e-22	78.1	456	492
UBD/Beta-Prp	1.50e-53	182.7	411	675

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDlrtgv 34
           H ++v+++af  ++  l +++++dD+tikvW+ ++g+
   Q: 456  HVGGVNDIAFahPNkQLcIITCGDDKTIKVWEATSGT 492
           99*********97653359*************98885 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl...sgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp 104
           ++  ++ + +spd++l+ +++ ++ +++++++ g+ +r+      h ++v+++ f +  k   ++t+++D+tikvw+  +g+   t++ghe+ v+s+  + 
   Q: 411  PTVSVNRIIWSPDGTLFGVAYSRHIVQIYSYHGGDDIRQHleiDAHVGGVNDIAFAHPNKqlCIITCGDDKTIKVWEATSGTKQFTFEGHEAPVYSVCPHY 511
           5556777889************************99665323389**********99888899*********************************85554 PP
   S: 105  ..sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsG..slDrtvrl..Wdlktgkllrtltgghtdsvyslsfdsngkelvsgs 199
             + +++ s+  d  i+ w  ++     + +++  ++ ++++++ dg+ l+s+  s+D+   l  W+ + g + rt +g  ++s   ++fd +++++++++
   Q: 512  keNIQFIFSTALDGKIKAWLYDNLGSRVDYDAP-GHWCTTMAYSADGSRLFSCgtSKDGESHLveWNESEGAVKRTYQGFRKRSMGVVQFDTTRNRFLAAG 611
           4388***************99998777756555.5599999999*9*999998334566544333999********************************* PP
   S: 200  ldgtvklwdlqtgecvrtlnghtdnvks..vrfspnderlvsgssDgsiriW.dlrsgdllktl 260
           +   +k+wd+ +++ + t ++    + s  +rf +++++l++ + D+ i++  + +   ll+tl
   Q: 612  DEFVIKIWDMDNTSLLTTIEADGGLPASprIRFNKEGTLLAVSTVDNGIKVLaNADGVRLLRTL 675
           *********************998777533788899999999999***9995455555555555 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFYFNMKY FEDEVINGNW DEVERYLGGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDKHDR SKAVEILVKD LKVFASFNEE LFKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTTCTC TCAGCCGGGA GCTCGTCTTC CTCATCCTGC AGTTCCTCGA TGAGGAGAAG 60
TTCAAGGAGA CCGTCCACAA GTGAGTGATT CAAACTCCAA AAATAAATAA ATAAAGTCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR027728--Topless_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0006355--P:regulation of transcription, DNA-templated

KEGG

ats:F775_25939

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002737	Amborella trichopoda	77.53	0.00e+00	1743.00
IUUC-Aly-005472	Arabidopsis lyrata	77.46	0.00e+00	1725.00
IUUC-Ath-007640	Arabidopsis thaliana	76.59	0.00e+00	1734.00
IUUC-Bdi-014914	Brachypodium distachyon	93.42	0.00e+00	2112.00
IUUC-Bol-015359	Brassica oleracea	77.26	0.00e+00	1731.00
IUUC-Bra-016893	Brassica rapa	76.91	0.00e+00	1727.00
IUUC-Gma-043911	Glycine max	80.02	0.00e+00	1820.00
IUUC-Hvu-047688	Hordeum vulgare	96.56	0.00e+00	2075.00
IUUC-Lpe-051514	Leersia perrieri	89.33	0.00e+00	1984.00
IUUC-Mtr-058037	Medicago truncatula	79.79	0.00e+00	1781.00
IUUC-Mac-065382	Musa acuminata	80.64	0.00e+00	1882.00
IUUC-Oba-075912	Oryza barthii	92.09	0.00e+00	2056.00
IUUC-Obr-076921	Oryza brachyantha	92.19	0.00e+00	2083.00
IUUC-Ogl-077334	Oryza glaberrima	92.19	0.00e+00	2085.00
IUUC-Ogu-078494	Oryza glumaepatula	92.19	0.00e+00	2085.00
IUUC-Oin-079720	Oryza indica	91.07	0.00e+00	2076.00
IUUC-Olo-081034	Oryza longistaminata	88.65	0.00e+00	2037.00
IUUC-Ome-081778	Oryza meridionalis	92.11	0.00e+00	2088.00
IUUC-Oni-082412	Oryza nivara	92.09	0.00e+00	2056.00
IUUC-Opu-083406	Oryza punctata	90.74	0.00e+00	2027.00
IUUC-Oru-084328	Oryza rufipogon	92.07	0.00e+00	2073.00
IUUC-Osa-085765	Oryza sativa	92.19	0.00e+00	2085.00
IUUC-Pop-098876	Populus trichocarpa	77.55	0.00e+00	1769.00
IUUC-Ppe-101370	Prunus persica	81.36	0.00e+00	1868.00
IUUC-Sit-110288	Setaria italica	90.45	0.00e+00	2034.00
IUUC-Sly-111739	Solanum lycopersicum	78.92	0.00e+00	1792.00
IUUC-Stu-112409	Solanum tuberosum	69.50	0.00e+00	1595.00
IUUC-Sbi-114078	Sorghum bicolor	90.27	0.00e+00	2028.00
IUUC-Tca-121628	Theobroma cacao	79.22	0.00e+00	1796.00
IUUC-Tae-125600	Triticum aestivum	98.42	0.00e+00	2242.00
IUUC-Tur-126412	Triticum urartu	96.58	0.00e+00	2224.00
IUUC-Vvi-131079	Vitis vinifera	79.39	0.00e+00	1800.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence