iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bdi-014914

Ensembl Protein ID

BRADI1G67800.1

UniProt Accession

I1H7C5; I1H7C5_BRADI

Genbank Protein ID

KQK22521.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000880

Gene Name

LOC100832687; BRADI_1g67800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI1G67800	BRADI1G67800.1	BRADI1G67800.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.40e-26	90.4	456	492
UBD/Beta-Prp	5.80e-50	170.7	415	677

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDlrtgv 34
           H ++v+++af  ++  l +++++dD+tikvW+ ++gv
   Q: 456  HVGGVNDIAFahPNkQLcIITCGDDKTIKVWEATSGV 492
           99*********97653359*************99997 PP

UBD/Beta-Prp

   S: 13   itcvkfspdksllatgsrdgtikvwdvttgkllrs...lsgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkghedsvlslsf 102
           ++ + +spd++l+ +++  + ++++ ++ g+ +r+   ++ h ++v+++ f +  k   ++t+++D+tikvw+  +g    t++ghe+ v+s+  
   Q: 415  VNRIIWSPDGTLFGVAYSKHIVQIYAYQGGDDIRQhleIEAHVGGVNDIAFAHPNKqlCIITCGDDKTIKVWEATSGVKQFTFEGHEAPVYSVCP 509
           556888************************99654211699**********99888899*********************************855 PP
   S: 103  sp..sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsG..slDrtvrl..Wdlktgkllrtltgghtdsvyslsfdsn 191
           +   + +++ s+  d  i+ w  ++     + +++  ++ ++++++ dg+ l+s+  s+D+   l  W+ + g + rt +g  ++s   ++fd +
   Q: 510  HYkeNIQFIFSTALDGKIKAWLYDNLGSRVDYDAP-GHWCTTMSYSADGSRLFSCgtSKDGESHLveWNESEGAVKRTYQGFRKRSMGVVQFDTT 603
           544388***************99998777755555.569999*******999998334566544333999************************* PP
   S: 192  gkelvsgsldgtvklwdlqtgecvrtlnghtdnvks..vrfspnderlvsgssDgsiriW.dlrsgdllktlql 262
           +++++++++   +k+wd+ +++ + t  +    + s  +rf +++++l++ ++D+ i++  + +   ll+tl++
   Q: 604  RNRFLAAGDEFVIKIWDMDNTSLLTTIDAEGGLPASprIRFNKEGTLLAVSTADNGIKVLaNADGVRLLRTLEN 677
           ***************************999988775337888999***9999******9656666566666555 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFYFNMKY FEDEVINGNW DEVERYLGGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDKHDR SKAVEILVKD LKVFASFNEE LFKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTTCTC TGAGTCGGGA GCTGGTCTTC CTCATCCTGC AGTTCCTCGA CGAGGAGAAG 60
TTTAAGGAGA CTGTCCACAA GTGAGTGACT GAAACAAAAA ATATGACAAA ATATGTTGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR027728--Topless_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0006355--P:regulation of transcription, DNA-templated

KEGG

bdi:100832687

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000565	Aegilops tauschii	94.12	0.00e+00	2143.00
IUUC-Atr-002737	Amborella trichopoda	77.32	0.00e+00	1739.00
IUUC-Aly-005472	Arabidopsis lyrata	77.61	0.00e+00	1726.00
IUUC-Ath-007640	Arabidopsis thaliana	76.55	0.00e+00	1734.00
IUUC-Bol-015359	Brassica oleracea	76.88	0.00e+00	1721.00
IUUC-Bra-016893	Brassica rapa	76.70	0.00e+00	1716.00
IUUC-Gma-043911	Glycine max	79.91	0.00e+00	1816.00
IUUC-Hvu-047688	Hordeum vulgare	94.58	0.00e+00	2017.00
IUUC-Lpe-051514	Leersia perrieri	89.10	0.00e+00	1968.00
IUUC-Mtr-058037	Medicago truncatula	79.68	0.00e+00	1772.00
IUUC-Mac-065382	Musa acuminata	80.97	0.00e+00	1872.00
IUUC-Oba-075912	Oryza barthii	92.14	0.00e+00	2043.00
IUUC-Obr-076921	Oryza brachyantha	91.45	0.00e+00	2065.00
IUUC-Ogl-077334	Oryza glaberrima	92.24	0.00e+00	2074.00
IUUC-Ogu-078494	Oryza glumaepatula	92.24	0.00e+00	2074.00
IUUC-Oin-079720	Oryza indica	90.80	0.00e+00	2063.00
IUUC-Olo-081034	Oryza longistaminata	87.81	0.00e+00	2022.00
IUUC-Ome-081778	Oryza meridionalis	92.33	0.00e+00	2081.00
IUUC-Oni-082412	Oryza nivara	92.14	0.00e+00	2042.00
IUUC-Opu-083406	Oryza punctata	90.79	0.00e+00	2011.00
IUUC-Oru-084328	Oryza rufipogon	92.12	0.00e+00	2062.00
IUUC-Osa-085765	Oryza sativa	92.24	0.00e+00	2074.00
IUUC-Pop-098876	Populus trichocarpa	76.92	0.00e+00	1766.00
IUUC-Ppe-101370	Prunus persica	80.75	0.00e+00	1857.00
IUUC-Sit-110288	Setaria italica	90.48	0.00e+00	2025.00
IUUC-Sly-111739	Solanum lycopersicum	78.26	0.00e+00	1786.00
IUUC-Stu-112409	Solanum tuberosum	69.52	0.00e+00	1588.00
IUUC-Sbi-114078	Sorghum bicolor	90.31	0.00e+00	2027.00
IUUC-Tca-121628	Theobroma cacao	78.41	0.00e+00	1794.00
IUUC-Tae-125398	Triticum aestivum	94.98	0.00e+00	2158.00
IUUC-Tur-126412	Triticum urartu	92.33	0.00e+00	2128.00
IUUC-Vvi-131079	Vitis vinifera	79.11	0.00e+00	1794.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence