iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043635

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000853

Gene Name

LOC100527039; GLYMA_20G084500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA20G21330	GLYMA20G21330.1	GLYMA20G21330.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.80e-24	85.0	396	428
E3 activity/RING/U-box	9.80e-16	59.2	2	68
UBD/Beta-Prp	3.90e-45	155.9	221	470

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrt 32
           gH+++vt+++f  ++ +l+++++Dg +k+WDlr+
   Q: 396  GHAGPVTAISFseNGYFLATAAHDG-VKLWDLRK 428
           8**********8665889******7.8****986 PP

E3 activity/RING/U-box

   S: 7    lCpIslelMrdPvvlp.sGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +C+Is+e++++Pvv+  sG  ++++ Ie++++++gk cP+t++plt +d+vP +t + +  + +++ s
   Q: 2    NCSISGEVPEEPVVSRnSGLLFEKRLIERHISDYGK-CPITGEPLTMDDIVPIKTGKIVKPRPVQAAS 68
           7***************9*******************.*********************9998887765 PP

UBD/Beta-Prp

   S: 49   sgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvw...dletgqcleetlsghdgv 139
           + +++++ ++++  ++++++tg+ D ++ ++d  +g++++tl+gh+++v+s++f ++g++++++s+d+t+r+w   d  ++ c + +l+ h++ 
   Q: 221  KTNKQGIISLDILYSKDLIATGGIDTNAVIFDRPSGQILSTLSGHSKKVTSVKFVAQGESFLTASADKTVRLWqgsDDGNYNCRH-ILKDHSAE 313
           5677889999999999999999999999999999999999999999999999999999999999999999998333556667777.99999999 PP
   S: 140  vncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl..tgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs 231
           v+ v+vh ++n++v++slD+   ++ l++g++l++   t+g  +  +s +f+++g  l +g + + vk+wd++++  v ++ gh  +v+ + fs
   Q: 314  VQAVTVHATNNYFVTASLDGSWCFYELSSGTCLTQVydTSGSSEGYTSAAFHPDGLILGTGTTESLVKIWDVKSQANVARFDGHAGPVTAISFS 407
           9999999999999999999999999999999999999966699999999999999999999999999999999999999999999999999999 PP
   S: 232  pnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedskvniwklkk 296
           +n+ +l+++++Dg +++Wdlr+ ++ ++++   +s ++ + ++f+++  +l+ + s+++i+++++
   Q: 408  ENGYFLATAAHDG-VKLWDLRKLKNFRNFAP-YDSETPTSSVEFDHSGSYLAVAGSDIRIYQVAN 470
           8888888888665.89999999999999986.567777777788888888888888899999876 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MNCSISGEVP EEPVVSRNSG LLFEKRLIER HISDYGKCPI TGEPLTMDDI VPIKTGKIVK 60
PRPVQAASIP GMLGMFQNEW DGLMLSNFAL EQQLHTARQE LSHALYQHDA ACRVIARLKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTAACTTACC ATTTAGACCC GAAATGGAAA ATGGACCGGG TATTTGGGTC GGCCCGTCCT 60
GGGTGCATAT CCAGTATCGT ATCCAGTTGT AATAAAAGAT ACCTCTCTCA CTTTCTGTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR013915--Pre-mRNA_splic_Prp19
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08606--Prp19
PF00400--WD40

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0000974--C:Prp19 complex
GO:0071006--C:U2-type catalytic step 1 spliceosome
GO:0004842--F:ubiquitin-protein transferase activity
GO:0000349--P:generation of catalytic spliceosome for first transesterification step

KEGG

gmx:100527039

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000488	Aegilops tauschii	69.04	0.00e+00	752.00
IUUC-Atr-002594	Amborella trichopoda	75.95	0.00e+00	847.00
IUUC-Aly-005586	Arabidopsis lyrata	75.62	0.00e+00	831.00
IUUC-Ath-007696	Arabidopsis thaliana	74.42	0.00e+00	812.00
IUUC-Acl-008335	Aspergillus clavatus	32.83	2.00e-60	226.00
IUUC-Afl-008527	Aspergillus flavus	32.71	1.00e-64	240.00
IUUC-Ani-009280	Aspergillus nidulans	34.99	7.00e-64	238.00
IUUC-Aor-009905	Aspergillus oryzae	32.50	3.00e-67	248.00
IUUC-Ame-011561	Astyanax mexicanus	42.91	4.00e-41	161.00
IUUC-Bgr-012283	Blumeria graminis	30.17	3.00e-53	202.00
IUUC-Bci-013901	Botrytis cinerea	32.76	1.00e-66	246.00
IUUC-Bdi-014277	Brachypodium distachyon	76.15	0.00e+00	838.00
IUUC-Bol-016207	Brassica oleracea	75.00	0.00e+00	820.00
IUUC-Bra-017650	Brassica rapa	76.35	0.00e+00	830.00
IUUC-Cre-022993	Chlamydomonas reinhardtii	45.58	5.00e-132	464.00
IUUC-Cin-025699	Ciona intestinalis	44.67	1.00e-101	363.00
IUUC-Csv-026128	Ciona savignyi	43.31	5.00e-114	404.00
IUUC-Cgl-026507	Colletotrichum gloeosporioides	31.80	1.00e-63	236.00
IUUC-Cne-026860	Cryptococcus neoformans	37.79	9.00e-93	333.00
IUUC-Ete-033035	Echinops telfairi	45.57	3.00e-54	206.00
IUUC-Fox-037922	Fusarium oxysporum	31.49	1.00e-65	243.00
IUUC-Ggr-039854	Gaeumannomyces graminis	32.52	8.00e-56	211.00
IUUC-Hvu-047442	Hordeum vulgare	71.66	8.00e-136	476.00
IUUC-Lpe-050976	Leersia perrieri	75.19	0.00e+00	816.00
IUUC-Lma-053143	Leptosphaeria maculans	32.01	2.00e-63	238.00
IUUC-Mor-057215	Magnaporthe oryzae	32.57	8.00e-62	231.00
IUUC-Mpo-057419	Magnaporthe poae	30.90	3.00e-52	199.00
IUUC-Mtr-057756	Medicago truncatula	87.43	0.00e+00	954.00
IUUC-Ncr-068729	Neurospora crassa	32.78	2.00e-60	226.00
IUUC-Oan-073498	Ornithorhynchus anatinus	33.33	5.00e-35	141.00
IUUC-Oba-075509	Oryza barthii	75.77	0.00e+00	833.00
IUUC-Obr-076480	Oryza brachyantha	75.77	0.00e+00	837.00
IUUC-Ogl-077052	Oryza glaberrima	75.77	0.00e+00	833.00
IUUC-Ogu-078919	Oryza glumaepatula	75.96	0.00e+00	834.00
IUUC-Oin-079357	Oryza indica	72.12	0.00e+00	773.00
IUUC-Olo-080376	Oryza longistaminata	75.98	0.00e+00	782.00
IUUC-Ome-081973	Oryza meridionalis	75.98	0.00e+00	781.00
IUUC-Oni-082849	Oryza nivara	75.38	0.00e+00	829.00
IUUC-Opu-083243	Oryza punctata	76.15	0.00e+00	835.00
IUUC-Oru-084613	Oryza rufipogon	75.58	0.00e+00	831.00
IUUC-Osa-085407	Oryza sativa	75.58	0.00e+00	830.00
IUUC-Pno-095115	Phaeosphaeria nodorum	32.71	2.00e-62	233.00
IUUC-Ppa-095924	Physcomitrella patens	71.43	0.00e+00	763.00
IUUC-Pop-099854	Populus trichocarpa	82.48	0.00e+00	931.00
IUUC-Ppe-101383	Prunus persica	78.24	0.00e+00	845.00
IUUC-Pgr-103304	Puccinia graminis	34.94	4.00e-77	282.00
IUUC-Pte-104385	Pyrenophora teres	30.83	7.00e-60	224.00
IUUC-Pyt-104697	Pyrenophora triticirepentis	30.12	5.00e-60	225.00
IUUC-Sce-106147	Saccharomyces cerevisiae	24.51	1.00e-23	104.00
IUUC-Sja-107697	Schizosaccharomyces japonicus	32.05	1.00e-40	160.00
IUUC-Spo-108315	Schizosaccharomyces pombe	28.77	3.00e-41	162.00
IUUC-Ssl-108628	Sclerotinia sclerotiorum	31.36	5.00e-62	231.00
IUUC-Smo-109648	Selaginella moellendorffii	67.50	0.00e+00	744.00
IUUC-Sit-109873	Setaria italica	75.43	0.00e+00	830.00
IUUC-Sly-111673	Solanum lycopersicum	81.92	0.00e+00	874.00
IUUC-Stu-112125	Solanum tuberosum	82.31	0.00e+00	872.00
IUUC-Sbi-114696	Sorghum bicolor	69.29	0.00e+00	731.00
IUUC-Tca-121807	Theobroma cacao	81.33	0.00e+00	910.00
IUUC-Tvi-122294	Trichoderma virens	31.54	1.00e-50	194.00
IUUC-Tae-125713	Triticum aestivum	74.81	0.00e+00	827.00
IUUC-Tur-126664	Triticum urartu	64.73	0.00e+00	752.00
IUUC-Tme-127026	Tuber melanosporum	35.62	4.00e-69	255.00
IUUC-Vda-129699	Verticillium dahliae	33.26	1.00e-61	230.00
IUUC-Vvi-131668	Vitis vinifera	85.52	0.00e+00	954.00
IUUC-Xtr-132186	Xenopus tropicalis	45.91	1.00e-99	356.00
IUUC-Yli-134607	Yarrowia lipolytica	52.67	3.00e-36	144.00
IUUC-Zma-135662	Zea mays	75.43	0.00e+00	832.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence