iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mga-060079

Ensembl Protein ID

ENSMGAP00000005158.1

UniProt Accession

G1N116; G1N116_MELGA

Protein Name

Uncharacterized protein

Gene Name

WDR43

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMGAG00000005248.2	ENSMGAT00000005889.1	ENSMGAP00000005158.1
ENSMGAG00000005248.2	ENSMGAT00000019191.1	ENSMGAP00000017972.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.10e-13	48.8	93	123

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
            ++sv++l+  +d ++l+s++   tik+WDl t
   Q: 93   DSSSVSSLCIsPDgKMLLSAG--RTIKLWDLET 123
           5899*******999*****88..88*****977 PP

Organism

Meleagris gallopavo

Protein Sequence
(Fasta)

LQDGPQRKKR KSEATGVDKQ LDILAIGTAV GSILLYSTVK GELQSKLDGG HDNRINCVRW 60
HQDNCCLYSC SEDKHIVEWN TQTCKVKCKW KGDSSSVSSL CISPDGKMLL SAGRTIKLWD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTGCAGGATG GCCCCCAGAG GAAAAAACGG AAGTCTGAAG CTACAGGAGT GGACAAGCAG 60
TTAGACATCC TGGCTATTGG CACAGCAGTT GGTAGCATTT TGTTGTACAG CACAGTAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR023302--Pept_S9A_N
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0001650--C:fibrillar center
GO:0003723--F:RNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001865	Ailuropoda melanoleuca	74.00	0.00e+00	760.00
IUUC-Atr-002533	Amborella trichopoda	21.58	2.00e-20	93.60
IUUC-Apl-003242	Anas platyrhynchos	95.68	0.00e+00	1016.00
IUUC-Aca-004607	Anolis carolinensis	74.79	0.00e+00	834.00
IUUC-Aly-006074	Arabidopsis lyrata	24.36	6.00e-14	72.00
IUUC-Ath-007222	Arabidopsis thaliana	27.50	7.00e-13	68.60
IUUC-Ame-011014	Astyanax mexicanus	57.33	3.00e-163	568.00
IUUC-Bta-012605	Bos taurus	75.52	0.00e+00	766.00
IUUC-Bdi-014072	Brachypodium distachyon	21.46	4.00e-13	69.30
IUUC-Bol-016255	Brassica oleracea	26.67	8.00e-15	75.10
IUUC-Bra-016850	Brassica rapa	22.53	3.00e-17	83.20
IUUC-Cja-019620	Callithrix jacchus	73.81	0.00e+00	753.00
IUUC-Cfa-020520	Canis familiaris	74.19	0.00e+00	762.00
IUUC-Cpo-022456	Cavia porcellus	69.34	0.00e+00	720.00
IUUC-Cho-024726	Choloepus hoffmanni	73.80	0.00e+00	724.00
IUUC-Cin-025761	Ciona intestinalis	37.02	9.00e-91	327.00
IUUC-Dre-028051	Danio rerio	56.85	9.00e-160	556.00
IUUC-Dno-030031	Dasypus novemcinctus	73.24	0.00e+00	753.00
IUUC-Dme-031653	Drosophila melanogaster	27.06	4.00e-35	142.00
IUUC-Ete-032863	Echinops telfairi	86.71	4.00e-70	258.00
IUUC-Eca-033243	Equus caballus	74.42	0.00e+00	744.00
IUUC-Eeu-034970	Erinaceus europaeus	70.39	3.00e-177	614.00
IUUC-Fca-036009	Felis catus	74.19	0.00e+00	760.00
IUUC-Fal-037264	Ficedula albicollis	91.84	0.00e+00	988.00
IUUC-Gmo-039124	Gadus morhua	56.87	1.00e-157	549.00
IUUC-Gga-040862	Gallus gallus	97.23	0.00e+00	1011.00
IUUC-Gac-041468	Gasterosteus aculeatus	53.30	6.00e-165	573.00
IUUC-Gma-042795	Glycine max	24.48	1.00e-08	54.70
IUUC-Ggo-044432	Gorilla gorilla	73.43	0.00e+00	750.00
IUUC-Hsa-047036	Homo sapiens	73.62	0.00e+00	751.00
IUUC-Itr-048644	Ictidomys tridecemlineatus	72.85	0.00e+00	735.00
IUUC-Lch-049553	Latimeria chalumnae	65.60	0.00e+00	744.00
IUUC-Laf-053462	Loxodonta africana	72.49	0.00e+00	766.00
IUUC-Mcc-055239	Macaca mulatta	73.62	0.00e+00	748.00
IUUC-Mtr-057977	Medicago truncatula	22.34	8.00e-10	58.50
IUUC-Mmr-061472	Microcebus murinus	72.68	0.00e+00	747.00
IUUC-Mdo-061972	Monodelphis domestica	69.22	0.00e+00	792.00
IUUC-Mmu-063354	Mus musculus	71.35	0.00e+00	725.00
IUUC-Mpu-066877	Mustela putorius furo	74.76	0.00e+00	763.00
IUUC-Mlu-067476	Myotis lucifugus	72.68	0.00e+00	744.00
IUUC-Nle-069119	Nomascus leucogenys	73.81	0.00e+00	751.00
IUUC-Ont-072093	Oreochromis niloticus	54.75	2.00e-176	612.00
IUUC-Oan-072944	Ornithorhynchus anatinus	70.96	0.00e+00	828.00
IUUC-Ocu-074472	Oryctolagus cuniculus	73.06	0.00e+00	729.00
IUUC-Oba-075009	Oryza barthii	19.31	1.00e-10	61.20
IUUC-Ogl-077189	Oryza glaberrima	19.69	7.00e-11	62.00
IUUC-Oin-079064	Oryza indica	19.31	1.00e-10	61.20
IUUC-Oru-084620	Oryza rufipogon	19.31	3.00e-10	60.10
IUUC-Osa-085345	Oryza sativa	19.31	1.00e-10	61.20
IUUC-Ola-086626	Oryzias latipes	53.95	3.00e-174	605.00
IUUC-Oga-087911	Otolemur garnettii	72.68	0.00e+00	738.00
IUUC-Ptr-091603	Pan troglodytes	73.62	0.00e+00	751.00
IUUC-Pan-092569	Papio anubis	73.62	0.00e+00	748.00
IUUC-Pma-094287	Petromyzon marinus	53.37	4.00e-169	587.00
IUUC-Ppa-095327	Physcomitrella patens	26.57	5.00e-22	99.40
IUUC-Pfo-097292	Poecilia formosa	56.10	9.00e-167	580.00
IUUC-Pab-097878	Pongo abelii	73.81	0.00e+00	751.00
IUUC-Pop-099418	Populus trichocarpa	23.12	1.00e-11	64.70
IUUC-Pca-100941	Procavia capensis	67.98	0.00e+00	675.00
IUUC-Ppe-101779	Prunus persica	20.48	3.00e-13	70.10
IUUC-Pva-102493	Pteropus vampyrus	67.17	0.00e+00	678.00
IUUC-Rno-105084	Rattus norvegicus	70.40	0.00e+00	704.00
IUUC-Sha-107486	Sarcophilus harrisii	74.76	0.00e+00	791.00
IUUC-Smo-108825	Selaginella moellendorffii	22.85	5.00e-17	82.40
IUUC-Sit-110825	Setaria italica	20.16	2.00e-09	57.40
IUUC-Sar-113326	Sorex araneus	81.14	1.00e-84	306.00
IUUC-Sbi-114426	Sorghum bicolor	21.23	7.00e-12	65.10
IUUC-Tgu-116726	Taeniopygia guttata	89.25	0.00e+00	976.00
IUUC-Tru-117848	Takifugu rubripes	56.82	6.00e-165	573.00
IUUC-Tsy-119091	Tarsius syrichta	53.81	2.00e-106	379.00
IUUC-Tni-120591	Tetraodon nigroviridis	57.28	1.00e-164	572.00
IUUC-Tca-121576	Theobroma cacao	24.48	2.00e-14	73.90
IUUC-Tae-125105	Triticum aestivum	21.01	2.00e-11	63.90
IUUC-Tbe-127832	Tupaia belangeri	73.95	0.00e+00	751.00
IUUC-Ttr-128812	Tursiops truncatus	75.48	0.00e+00	763.00
IUUC-Xma-133557	Xiphophorus maculatus	56.47	2.00e-167	582.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence