iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121644

Ensembl Protein ID

EOY22646

UniProt Accession

A0A061FZH1; A0A061FZH1_THECC

Genbank Protein ID

EOY22646.1

Protein Name

Nucleotide binding protein, putative isoform 2

Genbank Nucleotide ID

CM001881

Gene Name

TCM_014755

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_014755	EOY22646	EOY22646
TCM_014755	EOY22645	EOY22645

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.10e-13	49.0	330	360

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf....sdtllvsGsdDgtikvWDlrt 32
            ++++ f    + t +v+G+ D+ + +WD r+
   Q: 330  IINSIIFmpweN-TCFVTGGSDHAVVLWDERD 360
           589999997533.99**************776 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MSASLTIAKK VKEEEAEEDE AATGEDEDSR AEQEEALVAL IEHRTKEVDH LRQRISYYNS 60
QLHQAEKRLQ DSQSKLTRLR ERHNRASSGG SLANGTKNVK VEPRSTSPEH INGGFRNQPQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAATTGCAAA AACTCAAGAA AAGAAATGAT ATAACCAACC GCCCTTGTTC TGTCCAACAA 60
TAAAAGGAGA AAAAAGAAAA AAAAAAAAAA AAAGAGCGCC CTTGGGGTAG AGGACGCCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000679	Aegilops tauschii	58.14	1.00e-134	472.00
IUUC-Atr-002878	Amborella trichopoda	56.45	6.00e-151	526.00
IUUC-Aly-006473	Arabidopsis lyrata	63.15	3.00e-174	603.00
IUUC-Ath-006806	Arabidopsis thaliana	62.95	4.00e-171	593.00
IUUC-Bdi-014216	Brachypodium distachyon	50.91	7.00e-135	473.00
IUUC-Bol-015463	Brassica oleracea	62.52	0.00e+00	632.00
IUUC-Bra-017074	Brassica rapa	74.34	1.00e-170	592.00
IUUC-Gma-042665	Glycine max	69.41	0.00e+00	735.00
IUUC-Hvu-047292	Hordeum vulgare	65.00	5.00e-115	406.00
IUUC-Lpe-051627	Leersia perrieri	52.10	3.00e-140	491.00
IUUC-Mtr-058789	Medicago truncatula	67.49	0.00e+00	647.00
IUUC-Mac-065472	Musa acuminata	61.76	0.00e+00	625.00
IUUC-Oba-074995	Oryza barthii	61.27	2.00e-136	478.00
IUUC-Obr-076006	Oryza brachyantha	54.02	7.00e-149	519.00
IUUC-Ogl-077176	Oryza glaberrima	51.68	5.00e-143	500.00
IUUC-Ogu-078267	Oryza glumaepatula	51.68	7.00e-143	499.00
IUUC-Oin-079742	Oryza indica	64.71	2.00e-139	488.00
IUUC-Olo-080890	Oryza longistaminata	61.10	5.00e-125	440.00
IUUC-Ome-081454	Oryza meridionalis	51.28	8.00e-142	496.00
IUUC-Oni-083009	Oryza nivara	49.72	3.00e-139	488.00
IUUC-Opu-083781	Oryza punctata	65.71	6.00e-137	479.00
IUUC-Oru-084517	Oryza rufipogon	49.72	3.00e-139	488.00
IUUC-Osa-085484	Oryza sativa	64.71	1.00e-139	488.00
IUUC-Ppa-095859	Physcomitrella patens	44.34	5.00e-109	387.00
IUUC-Pop-099647	Populus trichocarpa	70.14	0.00e+00	704.00
IUUC-Ppe-101833	Prunus persica	74.52	0.00e+00	784.00
IUUC-Smo-109600	Selaginella moellendorffii	38.66	9.00e-47	179.00
IUUC-Sit-109887	Setaria italica	65.43	2.00e-139	488.00
IUUC-Sly-111601	Solanum lycopersicum	61.03	0.00e+00	693.00
IUUC-Stu-112708	Solanum tuberosum	54.12	9.00e-165	572.00
IUUC-Sbi-114727	Sorghum bicolor	51.59	4.00e-147	513.00
IUUC-Tae-123256	Triticum aestivum	63.97	9.00e-142	496.00
IUUC-Vvi-131460	Vitis vinifera	70.74	0.00e+00	726.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence