iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099214

Ensembl Protein ID

POPTR_0004s21500.1

UniProt Accession

U5GGQ0; U5GGQ0_POPTR

Genbank Protein ID

ERP62635.1

Protein Name

Ubiquitin family protein

Genbank Nucleotide ID

CM000340

Gene Name

POPTRDRAFT_741844; POPTR_0004s21500g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0004s21500	POPTR_0004s21500.1	POPTR_0004s21500.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	8.00e-08	33.3	528	562
ULD/UDP/UBQ/UBQ_PIM	2.80e-23	82.8	27	96

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 6    kleqlveMGF.dreealqaLraannnleaAveyLl 39
           +l ql+eMGF d++e+++aLra+ +n+ aAve+Ll
   Q: 528  QLSQLQEMGFfDTQENIRALRATAGNVHAAVERLL 562
           799******99***********************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 2    kltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvv 71
            ++v++++g++f+++ s ++tv  +K  ++++++vp++qq+LIy+G+iLkDd+tL ++g++ +++vh+v 
   Q: 27   VINVRCSNGTKFTVRTSLESTVGVFKSVLSRNCDVPADQQRLIYKGRILKDDQTLLSYGLQADHTVHMVR 96
           699*****************************************************************96 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGGAGDSSES KVSNEQGQGQ GEEGGVVINV RCSNGTKFTV RTSLESTVGV FKSVLSRNCD 60
VPADQQRLIY KGRILKDDQT LLSYGLQADH TVHMVRGFAP ASSTPAPAAA ATATAAAGGN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCAAAATTCG TACAAAGGAA AAGAATATTC TAGATATATT ATAAAAACGA AAAAAAAAAG 60
AACTCAAAAT CTCTCGATCC TCTCTTTCGA TTCCCAAATT TCCCTCTGAT TTTCCATTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR015496--Ubiquilin
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

KEGG

pop:POPTR_0004s21500g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002068	Ailuropoda melanoleuca	54.92	1.00e-35	143.00
IUUC-Apl-004150	Anas platyrhynchos	33.79	1.00e-43	170.00
IUUC-Ang-009826	Aspergillus niger	35.50	9.00e-18	83.60
IUUC-Bol-015326	Brassica oleracea	62.11	2.00e-153	535.00
IUUC-Cre-022634	Chlamydomonas reinhardtii	50.00	4.00e-13	68.60
IUUC-Cme-027155	Cyanidioschyzon merolae	53.03	1.00e-35	144.00
IUUC-Eeu-034727	Erinaceus europaeus	54.92	1.00e-35	144.00
IUUC-Fso-038204	Fusarium solani	46.27	4.00e-12	65.50
IUUC-Meu-056414	Macropus eugenii	50.28	2.00e-44	172.00
IUUC-Mpo-057467	Magnaporthe poae	58.14	6.00e-10	55.80
IUUC-Mla-058987	Melampsora laricipopulina	61.36	7.00e-11	61.20
IUUC-Mga-059894	Meleagris gallopavo	32.90	5.00e-51	194.00
IUUC-Mdo-062728	Monodelphis domestica	33.63	3.00e-52	199.00
IUUC-Mmu-064088	Mus musculus	32.58	3.00e-57	216.00
IUUC-Obr-076444	Oryza brachyantha	72.28	1.00e-57	217.00
IUUC-Olo-080565	Oryza longistaminata	61.92	7.00e-118	417.00
IUUC-Opu-083241	Oryza punctata	62.50	3.00e-127	448.00
IUUC-Pma-094727	Petromyzon marinus	42.86	2.00e-15	77.00
IUUC-Pte-104090	Pyrenophora teres	41.89	8.00e-13	67.80
IUUC-Pyt-104472	Pyrenophora triticirepentis	43.24	2.00e-13	69.30
IUUC-Rno-104908	Rattus norvegicus	33.92	8.00e-61	227.00
IUUC-Ssl-108425	Sclerotinia sclerotiorum	58.14	8.00e-10	57.00
IUUC-Sit-110766	Setaria italica	63.48	3.00e-111	395.00
IUUC-Stu-112263	Solanum tuberosum	70.35	2.00e-131	462.00
IUUC-Sbi-114307	Sorghum bicolor	62.63	4.00e-119	421.00
IUUC-Tsy-119596	Tarsius syrichta	57.50	2.00e-37	149.00
IUUC-Tre-122085	Trichoderma reesei	56.52	4.00e-10	58.50
IUUC-Tme-127116	Tuber melanosporum	27.27	1.00e-17	84.00
IUUC-Tbe-127379	Tupaia belangeri	36.50	1.00e-42	167.00
IUUC-Ttr-128771	Tursiops truncatus	36.14	2.00e-35	143.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence