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Tag Content
UUCD2 ID IUUC-Xtr-132005
UUCD1 version UUC-XeT-00967
Ensembl Protein ID ENSXETP00000002157.3
UniProt Accession Q6P315; RBBP7_XENTR
Genbank Protein ID AAH64219.1
Protein Name Histone-binding protein RBBP7; Retinoblastoma-binding protein 7
Genbank Nucleotide ID BC064219
Gene Name rbbp7
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSXETG00000026983.2 ENSXETT00000002157.3 ENSXETP00000002157.3
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 6.90e-38 127.2 271 305
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrtg 33
           Ht++v+cl+f   s+ +l++Gs D+t+ +WDlr  
   Q: 271  HTAEVNCLSFnpySEFILATGSADKTVALWDLRNL 305
           **********96554568*************9875 PP
   
Organism Xenopus tropicalis
Functional Description
(View)

Functional Description


     Core histone-binding subunit that may target chromatin remodeling factors, histone acetyltransferases and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA.
 Core histone-binding subunit that may target chromatin remodeling factors, histone acetyltransferases and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA.
Protein Sequence
(Fasta)
MANKEMFEDT VEERVINEEY KIWKKNTPFL YDLVMTHALE WPSLTVQWLP DVTRPEGKDY 60
ALHWLVLGTH TSDEQNHLVV ARVQIPNDDA QFDASHYDSE KGEFGGFGSV SGKIETEIKI 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Xtr-132005|E3,WD_repeat|Xenopus tropicalis
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CGGGAAGCTG CAGCAGGACC GGCACAAGCG CGGAACACTG GGTTTTTAGT CACCGCGAGG 60
CCGGCGGCCC TTGCATCTGC ACAGGAGTAG AGAAGATGGC GAATAAAGAG AGTAAGTGGG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Xtr-132005|E3,WD_repeat|Xenopus tropicalis
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0143--Chaperone
KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0235--DNA replication
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0035098--C:ESC/E(Z) complex
GO:0016569--P:covalent chromatin modification
GO:0006260--P:DNA replication
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated
KEGG xtr:394900
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000757 Aegilops tauschii 60.05 9.00e-140 489.00
IUUC-Aml-001256 Ailuropoda melanoleuca 94.31 0.00e+00 829.00
IUUC-Atr-003075 Amborella trichopoda 66.75 2.00e-169 588.00
IUUC-Apl-003357 Anas platyrhynchos 93.71 0.00e+00 826.00
IUUC-Aca-004508 Anolis carolinensis 92.12 0.00e+00 805.00
IUUC-Aly-006342 Arabidopsis lyrata 67.75 1.00e-164 572.00
IUUC-Ath-006855 Arabidopsis thaliana 67.57 1.00e-165 575.00
IUUC-Ago-007892 Ashbya gossypii 38.57 5.00e-79 288.00
IUUC-Acl-008163 Aspergillus clavatus 51.22 3.00e-123 435.00
IUUC-Afl-008645 Aspergillus flavus 51.32 3.00e-123 435.00
IUUC-Afu-009091 Aspergillus fumigatus 51.46 1.00e-123 436.00
IUUC-Ani-009478 Aspergillus nidulans 46.83 4.00e-102 364.00
IUUC-Ang-009707 Aspergillus niger 50.73 2.00e-119 421.00
IUUC-Aor-010028 Aspergillus oryzae 51.32 3.00e-123 435.00
IUUC-Ate-010416 Aspergillus terreus 50.73 1.00e-122 432.00
IUUC-Ame-011771 Astyanax mexicanus 92.49 0.00e+00 827.00
IUUC-Bgr-012001 Blumeria graminis 48.46 3.00e-106 378.00
IUUC-Bta-013455 Bos taurus 94.59 0.00e+00 838.00
IUUC-Bci-013815 Botrytis cinerea 49.52 8.00e-123 433.00
IUUC-Bdi-014926 Brachypodium distachyon 67.57 8.00e-163 566.00
IUUC-Bol-015856 Brassica oleracea 67.48 2.00e-165 575.00
IUUC-Bra-016725 Brassica rapa 65.42 1.00e-160 558.00
IUUC-Cel-018587 Caenorhabditis elegans 71.74 0.00e+00 631.00
IUUC-Cja-019957 Callithrix jacchus 94.08 0.00e+00 828.00
IUUC-Cfa-020917 Canis familiaris 94.31 0.00e+00 831.00
IUUC-Cpo-022173 Cavia porcellus 94.59 0.00e+00 839.00
IUUC-Cre-022563 Chlamydomonas reinhardtii 62.10 2.00e-154 538.00
IUUC-Csa-023738 Chlorocebus sabaeus 94.59 0.00e+00 839.00
IUUC-Cho-024506 Choloepus hoffmanni 91.08 0.00e+00 800.00
IUUC-Cin-025589 Ciona intestinalis 86.79 0.00e+00 783.00
IUUC-Csv-026216 Ciona savignyi 87.59 0.00e+00 785.00
IUUC-Cgl-026564 Colletotrichum gloeosporioides 47.72 1.00e-115 409.00
IUUC-Cne-026792 Cryptococcus neoformans 53.03 7.00e-132 463.00
IUUC-Cme-027307 Cyanidioschyzon merolae 50.92 4.00e-126 444.00
IUUC-Dre-028269 Danio rerio 93.35 0.00e+00 822.00
IUUC-Dno-029206 Dasypus novemcinctus 94.82 0.00e+00 840.00
IUUC-Dor-030733 Dipodomys ordii 81.52 0.00e+00 700.00
IUUC-Dse-031282 Dothistroma septosporum 45.11 1.00e-99 356.00
IUUC-Dme-032126 Drosophila melanogaster 88.28 0.00e+00 788.00
IUUC-Ete-032731 Echinops telfairi 91.55 0.00e+00 808.00
IUUC-Eca-034138 Equus caballus 94.31 0.00e+00 830.00
IUUC-Eeu-034644 Erinaceus europaeus 91.89 5.00e-122 430.00
IUUC-Fca-035977 Felis catus 94.31 0.00e+00 830.00
IUUC-Fal-037084 Ficedula albicollis 92.12 0.00e+00 805.00
IUUC-Fox-037974 Fusarium oxysporum 48.81 7.00e-120 423.00
IUUC-Fso-038246 Fusarium solani 47.95 5.00e-109 387.00
IUUC-Gmo-038593 Gadus morhua 93.32 0.00e+00 824.00
IUUC-Ggr-039741 Gaeumannomyces graminis 50.48 7.00e-117 413.00
IUUC-Gga-040764 Gallus gallus 95.76 0.00e+00 844.00
IUUC-Gac-042627 Gasterosteus aculeatus 92.51 0.00e+00 822.00
IUUC-Gma-042791 Glycine max 66.75 7.00e-163 566.00
IUUC-Ggo-045422 Gorilla gorilla 83.68 0.00e+00 714.00
IUUC-Hsa-045677 Homo sapiens 94.59 0.00e+00 839.00
IUUC-Hvu-047457 Hordeum vulgare 67.69 3.00e-76 277.00
IUUC-Itr-048060 Ictidomys tridecemlineatus 94.75 0.00e+00 828.00
IUUC-Kpa-049119 Komagataella pastoris 36.70 1.00e-69 256.00
IUUC-Lch-050545 Latimeria chalumnae 95.02 0.00e+00 845.00
IUUC-Lpe-051337 Leersia perrieri 67.57 4.00e-163 567.00
IUUC-Loc-052050 Lepisosteus oculatus 92.07 0.00e+00 826.00
IUUC-Lma-053275 Leptosphaeria maculans 46.96 2.00e-69 255.00
IUUC-Laf-053973 Loxodonta africana 94.37 0.00e+00 835.00
IUUC-Mcc-055687 Macaca mulatta 94.59 0.00e+00 839.00
IUUC-Meu-056490 Macropus eugenii 91.55 0.00e+00 808.00
IUUC-Mor-056947 Magnaporthe oryzae 50.12 8.00e-116 410.00
IUUC-Mpo-057602 Magnaporthe poae 49.52 1.00e-116 412.00
IUUC-Mtr-057853 Medicago truncatula 65.84 6.00e-160 556.00
IUUC-Mla-058884 Melampsora laricipopulina 51.32 3.00e-125 441.00
IUUC-Mga-059209 Meleagris gallopavo 92.94 0.00e+00 819.00
IUUC-Mvi-060450 Microbotryum violaceum 56.55 5.00e-134 470.00
IUUC-Mmr-061008 Microcebus murinus 94.08 0.00e+00 829.00
IUUC-Mdo-062817 Monodelphis domestica 98.12 0.00e+00 869.00
IUUC-Mmu-063773 Mus musculus 94.82 0.00e+00 840.00
IUUC-Mac-065480 Musa acuminata 66.58 5.00e-161 560.00
IUUC-Mpu-066722 Mustela putorius furo 94.31 0.00e+00 830.00
IUUC-Mlu-067813 Myotis lucifugus 94.31 0.00e+00 830.00
IUUC-Nfi-068374 Neosartorya fischeri 51.46 2.00e-120 425.00
IUUC-Ncr-068794 Neurospora crassa 47.85 9.00e-115 406.00
IUUC-Nle-070023 Nomascus leucogenys 94.08 0.00e+00 829.00
IUUC-Opr-070245 Ochotona princeps 76.53 0.00e+00 632.00
IUUC-Ont-072590 Oreochromis niloticus 91.80 0.00e+00 821.00
IUUC-Oan-073579 Ornithorhynchus anatinus 98.34 0.00e+00 862.00
IUUC-Ocu-074778 Oryctolagus cuniculus 94.35 0.00e+00 837.00
IUUC-Oba-075719 Oryza barthii 57.11 2.00e-135 476.00
IUUC-Obr-076859 Oryza brachyantha 67.16 4.00e-161 560.00
IUUC-Ogl-077920 Oryza glaberrima 67.32 6.00e-163 566.00
IUUC-Ogu-078048 Oryza glumaepatula 56.71 1.00e-134 473.00
IUUC-Oin-079960 Oryza indica 55.15 2.00e-122 432.00
IUUC-Olo-080553 Oryza longistaminata 54.40 7.00e-131 460.00
IUUC-Ome-081835 Oryza meridionalis 67.32 1.00e-163 569.00
IUUC-Oni-082494 Oryza nivara 56.47 8.00e-134 470.00
IUUC-Opu-083913 Oryza punctata 64.62 1.00e-151 529.00
IUUC-Oru-084666 Oryza rufipogon 67.32 6.00e-163 566.00
IUUC-Osa-085884 Oryza sativa 67.32 6.00e-163 566.00
IUUC-Ola-086664 Oryzias latipes 90.82 0.00e+00 809.00
IUUC-Olu-087579 Ostreococcus lucimarinus 63.68 8.00e-145 506.00
IUUC-Oga-088987 Otolemur garnettii 87.23 0.00e+00 746.00
IUUC-Oar-090250 Ovis aries 94.31 0.00e+00 825.00
IUUC-Ptr-091598 Pan troglodytes 94.52 0.00e+00 829.00
IUUC-Pan-092412 Papio anubis 94.59 0.00e+00 839.00
IUUC-Psi-093162 Pelodiscus sinensis 97.69 0.00e+00 791.00
IUUC-Pma-094307 Petromyzon marinus 87.53 0.00e+00 786.00
IUUC-Pno-095153 Phaeosphaeria nodorum 49.14 7.00e-109 387.00
IUUC-Ppa-095800 Physcomitrella patens 66.92 3.00e-165 574.00
IUUC-Pfo-097240 Poecilia formosa 92.00 0.00e+00 822.00
IUUC-Pab-097865 Pongo abelii 94.59 0.00e+00 839.00
IUUC-Pop-099709 Populus trichocarpa 66.83 5.00e-166 577.00
IUUC-Pca-100642 Procavia capensis 83.66 0.00e+00 694.00
IUUC-Ppe-101212 Prunus persica 66.83 1.00e-163 568.00
IUUC-Pva-102369 Pteropus vampyrus 94.31 0.00e+00 832.00
IUUC-Pgr-103441 Puccinia graminis 51.21 3.00e-119 421.00
IUUC-Pte-104332 Pyrenophora teres 49.50 2.00e-111 395.00
IUUC-Pyt-104516 Pyrenophora triticirepentis 49.50 2.00e-111 395.00
IUUC-Rno-105892 Rattus norvegicus 94.59 0.00e+00 839.00
IUUC-Sce-106364 Saccharomyces cerevisiae 37.09 6.00e-70 257.00
IUUC-Sha-107575 Sarcophilus harrisii 97.86 0.00e+00 858.00
IUUC-Sja-108001 Schizosaccharomyces japonicus 45.99 9.00e-105 373.00
IUUC-Spo-108145 Schizosaccharomyces pombe 48.03 2.00e-116 411.00
IUUC-Smo-109159 Selaginella moellendorffii 64.96 9.00e-162 562.00
IUUC-Sit-110144 Setaria italica 66.83 3.00e-154 538.00
IUUC-Sly-111680 Solanum lycopersicum 66.34 4.00e-164 570.00
IUUC-Stu-111931 Solanum tuberosum 67.00 9.00e-163 566.00
IUUC-Sar-113236 Sorex araneus 86.27 0.00e+00 729.00
IUUC-Sbi-114637 Sorghum bicolor 66.59 3.00e-162 564.00
IUUC-Sre-114980 Sporisorium reilianum 52.73 1.00e-134 472.00
IUUC-Ssc-116352 Sus scrofa 94.31 0.00e+00 832.00
IUUC-Tgu-116925 Taeniopygia guttata 91.89 0.00e+00 805.00
IUUC-Tru-117549 Takifugu rubripes 90.14 0.00e+00 791.00
IUUC-Tsy-118854 Tarsius syrichta 94.08 0.00e+00 829.00
IUUC-Tni-120398 Tetraodon nigroviridis 90.14 0.00e+00 796.00
IUUC-Tca-121841 Theobroma cacao 68.06 1.00e-165 575.00
IUUC-Tre-122190 Trichoderma reesei 49.76 3.00e-114 405.00
IUUC-Tvi-122304 Trichoderma virens 49.05 1.00e-121 429.00
IUUC-Tae-124648 Triticum aestivum 66.83 1.00e-154 538.00
IUUC-Tur-126850 Triticum urartu 63.24 2.00e-116 412.00
IUUC-Tme-126949 Tuber melanosporum 53.24 2.00e-129 455.00
IUUC-Tbe-128010 Tupaia belangeri 83.18 0.00e+00 722.00
IUUC-Ttr-128558 Tursiops truncatus 83.33 0.00e+00 713.00
IUUC-Uma-129424 Ustilago maydis 52.73 2.00e-134 472.00
IUUC-Vda-129873 Verticillium dahliae 48.57 6.00e-121 427.00
IUUC-Vpa-130664 Vicugna pacos 95.00 0.00e+00 830.00
IUUC-Vvi-131585 Vitis vinifera 66.83 6.00e-163 566.00
IUUC-Xma-133485 Xiphophorus maculatus 91.78 0.00e+00 818.00
IUUC-Yli-134334 Yarrowia lipolytica 37.68 2.00e-78 286.00
IUUC-Zma-135710 Zea mays 65.86 5.00e-155 540.00
Created Date 25-Jun-2017

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