iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099107

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

WD-40 repeat family protein

Genbank Nucleotide ID

CM000345

Gene Name

POPTRDRAFT_202067; POPTR_0009s09230g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0009s09230	POPTR_0009s09230.1	POPTR_0009s09230.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.90e-19	67.8	99	129

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDl 30
           H + v+c+++     + +++Gs+D+t+k+WD+
   Q: 99   HDAHVRCVEYsyaA-GQVITGSWDKTLKCWDP 129
           77789*****6432.88**************6 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MTAVIPPQFS GRELSNPPTD GISNLRFSNH SDHLLVSSWD KTVRLYDAGT NVLRGEFMHG 60
GAVLDCCFHD DSSGFSASAD NTVRRLVFNY EKEDILGRHD AHVRCVEYSY AAGQVITGSW 120

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Nucleotide Sequence
(Fasta)

ATGACAGCTG TCATCCCGCC ACAATTCTCC GGCCGCGAAC TCTCGAATCC CCCAACCGAC 60
GGGATCTCGA ACCTCCGATT CTCCAATCAC AGCGACCACC TGCTCGTCTC CTCATGGGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

pop:POPTR_0009s09230g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000710	Aegilops tauschii	81.14	1.00e-111	395.00
IUUC-Bol-015262	Brassica oleracea	87.42	1.00e-175	608.00
IUUC-Bra-016655	Brassica rapa	87.69	2.00e-175	607.00
IUUC-Mla-059131	Melampsora laricipopulina	39.50	2.00e-65	242.00
IUUC-Pgr-103482	Puccinia graminis	40.23	4.00e-54	204.00
IUUC-Ptt-103911	Puccinia triticina	40.75	1.00e-66	246.00
IUUC-Sit-110412	Setaria italica	83.60	2.00e-162	564.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence