iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058054

Ensembl Protein ID

KEH44035

UniProt Accession

A0A072W173; A0A072W173_MEDTR

Genbank Protein ID

KEH44035.1

Protein Name

C3HC4-type RING zinc finger protein

Genbank Nucleotide ID

CM001217

Gene Name

MTR_1g106815

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_1g106815	KEH44035	KEH44035

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.70e-06	28.4	200	241

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCle+f+dg  ++ l+CgH fh  Cl  w       +    CP+Cr
   Q: 200  CGICLESFMDGdkLIHLQCGHKFHSACLDPW------IRSCGDCPYCR 241
           9*******8775555599*************......99999*****8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MTSASELFHI RRHRLGRNDI DSSFHSSPSS DFHHHHRLHD SDDDDSPRIR RHYNVRRLRH 60
HERVSERFDG RYRRSLVNEG VESGESVRGA PRASGSERLP VDVRLARERL LQRLRGDPVD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTAAACCAAA ACCACGCTAA AGTTTAACCG AACTTTCCTG GAAAATATAC AGAATTGGAG 60
CATTTACAGT GTTGATTCTT CGTGGAAGTT ACATTGACTT TTGATTCATT CTTACATCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_1g106815

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000649	Aegilops tauschii	32.58	4.00e-14	70.90
IUUC-Atr-003023	Amborella trichopoda	35.38	2.00e-23	102.00
IUUC-Aly-006173	Arabidopsis lyrata	40.78	5.00e-32	130.00
IUUC-Bdi-014868	Brachypodium distachyon	33.95	2.00e-21	95.50
IUUC-Bol-015528	Brassica oleracea	36.90	3.00e-28	117.00
IUUC-Bra-016749	Brassica rapa	44.97	3.00e-26	111.00
IUUC-Hvu-047572	Hordeum vulgare	34.76	2.00e-23	101.00
IUUC-Lpe-050997	Leersia perrieri	35.62	1.00e-15	75.90
IUUC-Mac-064949	Musa acuminata	54.67	4.00e-23	100.00
IUUC-Oba-075741	Oryza barthii	34.36	5.00e-21	93.20
IUUC-Obr-076821	Oryza brachyantha	34.97	1.00e-21	95.90
IUUC-Ogl-077510	Oryza glaberrima	34.36	5.00e-21	94.00
IUUC-Ogu-078106	Oryza glumaepatula	31.86	2.00e-17	83.20
IUUC-Oin-080050	Oryza indica	33.74	2.00e-20	92.40
IUUC-Olo-080497	Oryza longistaminata	52.00	3.00e-19	87.40
IUUC-Ome-081477	Oryza meridionalis	34.36	5.00e-21	94.00
IUUC-Oni-083119	Oryza nivara	33.74	2.00e-20	92.00
IUUC-Opu-083882	Oryza punctata	35.05	2.00e-17	82.40
IUUC-Oru-085121	Oryza rufipogon	31.86	1.00e-17	83.20
IUUC-Osa-086007	Oryza sativa	34.36	5.00e-21	94.00
IUUC-Pop-099358	Populus trichocarpa	40.49	4.00e-29	120.00
IUUC-Ppe-101691	Prunus persica	51.72	2.00e-33	135.00
IUUC-Sit-110752	Setaria italica	35.58	4.00e-21	94.40
IUUC-Sbi-114507	Sorghum bicolor	36.20	8.00e-22	96.70
IUUC-Tca-121654	Theobroma cacao	64.00	8.00e-34	136.00
IUUC-Tae-123420	Triticum aestivum	33.33	7.00e-22	97.10
IUUC-Vvi-131679	Vitis vinifera	40.21	1.00e-32	132.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence