iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099440

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000342

Gene Name

POPTRDRAFT_416414; POPTR_0006s21610g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s21610	POPTR_0006s21610.1	POPTR_0006s21610.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-07	33.4	102	144

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl d+   +  +++lp CgH+fh+ C+  w       + + +CP+Cr
   Q: 102  CSICLADYkntD-KLRLLPdCGHLFHLRCVDPW------LRLHPTCPVCR 144
           ********6633.399999**************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MNSTAGDSGF LGSNNIGGFG YGIGISIGIL LLITTITLTS YFCTRNQLAS VPTQARNVAD 60
QQLNLQNFVV DIGLDEATLN SYPTLLYSEA KLHKTGSTAT CCSICLADYK NTDKLRLLPD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTCTCCCTT CAATATTCCT TGAGGACATG AATAGCACAG CAGGGGATTC TGGATTTCTT 60
GGCTCTAACA ACATTGGTGG ATTTGGCTAT GGCATCGGTA TCTCTATTGG AATCCTGCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0006s21610g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001148	Aegilops tauschii	48.86	5.00e-19	86.30
IUUC-Gma-044295	Glycine max	71.65	3.00e-43	167.00
IUUC-Mtr-058770	Medicago truncatula	65.48	3.00e-38	150.00
IUUC-Mac-065006	Musa acuminata	77.32	9.00e-34	135.00
IUUC-Sit-110656	Setaria italica	53.62	1.00e-29	122.00
IUUC-Tae-124786	Triticum aestivum	68.00	5.00e-29	120.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence