iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114260

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G097000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g008680	Sb01g008680.1	Sb01g008680.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-37	126.1	227	265

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvllk 37
           H+d v+cl+   ++ ++l sGs+D t kvW++++ ++l 
   Q: 227  HSDAVSCLSPtdPSqGFLYSGSWDRTFKVWRISDSKCLE 265
           9********999777*****************9999986 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MKDSDGEGAG GGVARSHPSN LPLPAPQSDP NLQYSGGTDD ESSNRNSSSS ATGGASPGYY 60
SDYPSSFSGE CSPYNMSPWN QTMASPWSHH SEASAAGLGG AAPTMAPGTS LISSLVREEG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCCGATCCA CCACGGCCGC CTCCGGCAGG AGACAGATGA AAGACAGCGA CGGCGAGGGC 60
GCCGGCGGTG GCGTCGCCCG CTCGCACCCG TCCAATCTCC CACTTCCTGC TCCACAGTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

sbi:SORBI_01g008680

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002457	Amborella trichopoda	59.39	2.00e-141	494.00
IUUC-Ath-006909	Arabidopsis thaliana	61.38	5.00e-130	456.00
IUUC-Bdi-014024	Brachypodium distachyon	86.76	0.00e+00	775.00
IUUC-Bol-015603	Brassica oleracea	58.51	2.00e-117	415.00
IUUC-Bra-017125	Brassica rapa	58.24	6.00e-130	456.00
IUUC-Gma-043481	Glycine max	56.88	7.00e-130	456.00
IUUC-Hvu-047445	Hordeum vulgare	85.04	0.00e+00	734.00
IUUC-Lpe-051623	Leersia perrieri	85.57	0.00e+00	714.00
IUUC-Mtr-057641	Medicago truncatula	62.03	6.00e-134	469.00
IUUC-Mac-065282	Musa acuminata	56.50	3.00e-106	377.00
IUUC-Oba-075783	Oryza barthii	86.82	0.00e+00	765.00
IUUC-Obr-076198	Oryza brachyantha	85.80	0.00e+00	758.00
IUUC-Ogl-077280	Oryza glaberrima	86.82	0.00e+00	765.00
IUUC-Ogu-078924	Oryza glumaepatula	87.22	0.00e+00	780.00
IUUC-Oin-079931	Oryza indica	86.82	0.00e+00	765.00
IUUC-Olo-080744	Oryza longistaminata	90.75	0.00e+00	628.00
IUUC-Oni-082948	Oryza nivara	86.82	0.00e+00	765.00
IUUC-Opu-083881	Oryza punctata	86.41	0.00e+00	757.00
IUUC-Oru-084999	Oryza rufipogon	86.82	0.00e+00	765.00
IUUC-Osa-085749	Oryza sativa	86.82	0.00e+00	765.00
IUUC-Ppa-095309	Physcomitrella patens	43.65	3.00e-70	258.00
IUUC-Pop-099113	Populus trichocarpa	60.60	3.00e-136	477.00
IUUC-Ppe-101355	Prunus persica	64.71	3.00e-134	471.00
IUUC-Sit-109859	Setaria italica	89.07	0.00e+00	734.00
IUUC-Sly-111122	Solanum lycopersicum	61.62	2.00e-122	431.00
IUUC-Stu-112301	Solanum tuberosum	60.40	3.00e-127	447.00
IUUC-Tca-121208	Theobroma cacao	58.85	3.00e-135	474.00
IUUC-Tae-122837	Triticum aestivum	78.20	0.00e+00	717.00
IUUC-Tur-126539	Triticum urartu	85.20	1.00e-142	498.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence