iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099198

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000345

Gene Name

POPTRDRAFT_558224; POPTR_0009s02140g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0009s02140	POPTR_0009s02140.1	POPTR_0009s02140.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.50e-31	108.2	5	80

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk..tcPvtrqpl.teedlvPnltlrrliqawceens 73
           evpe+flCpIsl++ +dPv++ +Gity+r+sIe+wl+  ++  tcPvt+q+l ++++l+Pn+tlrrliq+wc  n+
   Q: 5    EVPEYFLCPISLQILKDPVTTITGITYERESIEQWLKAAKSnpTCPVTKQSLpRDSELTPNHTLRRLIQSWCTVNA 80
           69**********************************5555455*********888889**************9886 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDEIEVPEYF LCPISLQILK DPVTTITGIT YERESIEQWL KAAKSNPTCP VTKQSLPRDS 60
ELTPNHTLRR LIQSWCTVNA IYGVDRIPTP KSPIKKSQIF RLIKDLDAPD DHLRTKALRR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATGAAA TAGAAGTTCC TGAATATTTT CTATGCCCCA TTTCGCTACA AATCCTGAAA 60
GACCCTGTTA CAACAATAAC AGGCATCACT TACGAGCGAG AAAGCATAGA GCAATGGTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0009s02140g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-043599	Glycine max	60.57	5.00e-142	496.00
IUUC-Hvu-047308	Hordeum vulgare	37.71	5.00e-69	254.00
IUUC-Mtr-057788	Medicago truncatula	58.55	3.00e-128	451.00
IUUC-Ppe-101876	Prunus persica	57.52	5.00e-136	476.00
IUUC-Sly-111553	Solanum lycopersicum	54.05	7.00e-126	442.00
IUUC-Stu-111998	Solanum tuberosum	55.71	2.00e-128	451.00
IUUC-Tca-121014	Theobroma cacao	66.91	6.00e-166	576.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence