iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006038

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin-specific protease 24

Genbank Nucleotide ID

GL348719

Gene Name

UBP24; ARALYDRAFT_913383

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_701125.1	scaffold_701125.1	scaffold_701125.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	6.70e-64	216.9	197	549

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeel............w.kskkkavsprellkalkke 80
           Gl N gN C++N++LQ+L++++++ +ll + + +++++      + + l ++ ++++el            +  +  + + p ++  +l+++
   Q: 197  GLINAGNLCFLNATLQALLSCSPFVQLLQRIQLQDIPKA-----DSPTLAAFSEFISELdvpssssirnnvTvVEAGRPFRPAMFEGVLRNF 283
           9*****************************777777665.....4566666666666664444444444431467777*************9 PP
   S: 81   aeefs.....gyeqqDaqEflaflldqleeelkk.eknkpkeeeeeedkselsde................aeekkkkknkslisdlFqgql 150
            + +        +q+DaqEfl+f++dq+++el k ++++pk ++++++ +++                   a  ++++  +s +s++F+gql
   Q: 284  TPDVLnnmsgRPRQEDAQEFLSFIMDQMHDELLKlKEQSPKVTASKSSVISS--AnddddewetvgpknksAVTRTQSFVPSELSEIFGGQL 373
           9995536665668*******************55422222222222222222..123467788888876666666666666999******** PP
   S: 151  ksqikclecdnvssreepfldlslpvpgkeetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfsee 242
           ks +k +   + s + +p l l l+++ +  +    ++d+L+ f+++e leg  +  + k  + + a+k++k++kl++++ilhL+Rfs+ ++
   Q: 374  KSVVKAKG-TKASATVQPYLLLHLDIHPDGVK---GIEDALHLFSAQEDLEGYRASVTGKT-GVVSASKSIKIQKLSKIMILHLMRFSYGSQ 460
           *9999876.567889***************88...*****************776666665.5788*********************99886 PP
   S: 243  qksrekinkkvefpleLdlsp.fctspeekqkekkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYv 332
              ++k++k v+fpleL+l++ +++s ++   e+ +YeL+a + H+G  +s+GHY+++++ ++g+Wl+fdD +Vt++  ++vl    ++aYv
   Q: 461  --GSTKLHKGVKFPLELNLNRnHLVSLSN---ESLRYELVATITHHGwDPSKGHYTTDARRKNGQWLRFDDPSVTAIGTKQVLH---DQAYV 544
           ..567***************867776443...389*************************************************...***** PP
   S: 333  lfYkr 337
           lfYk+
   Q: 545  LFYKQ 549
           ***97 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSEKKLFVFG SFTEHETRSF LEQKPTKDPQ NHKDKCVGSI QFGSLNLVAE NSSVNTNGEL 60
KKGQADGTVK SAGSQERLDA SRPDSSNKID DNDAKLPRKS SSRVPEHVVE NGIIKEISES 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTGCGTTCT ATGTGCCAAA TATGAGTGAA AAGAAGGTAA TTTCCTACTA CTTGTTGTTA 60
GCCTCTCAGT TTCTTCCCTT AAGATTTAAT TCTCATGGTC TAGATAACGA TGAAGAGTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0645--Protease
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0005634--C:nucleus
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

aly:ARALYDRAFT_913383

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000082	Aegilops tauschii	58.45	1.00e-115	410.00
IUUC-Aml-001584	Ailuropoda melanoleuca	34.62	5.00e-56	212.00
IUUC-Atr-002927	Amborella trichopoda	68.11	8.00e-145	506.00
IUUC-Apl-003988	Anas platyrhynchos	34.44	4.00e-51	195.00
IUUC-Aca-004461	Anolis carolinensis	34.73	7.00e-40	157.00
IUUC-Ath-007328	Arabidopsis thaliana	95.46	0.00e+00	1019.00
IUUC-Ago-007717	Ashbya gossypii	25.97	1.00e-33	137.00
IUUC-Acl-008188	Aspergillus clavatus	33.51	5.00e-51	195.00
IUUC-Afl-008456	Aspergillus flavus	37.16	2.00e-41	162.00
IUUC-Afu-009067	Aspergillus fumigatus	34.51	9.00e-53	201.00
IUUC-Ani-009483	Aspergillus nidulans	34.97	2.00e-51	196.00
IUUC-Ang-009639	Aspergillus niger	34.27	2.00e-50	193.00
IUUC-Aor-010040	Aspergillus oryzae	32.82	6.00e-51	195.00
IUUC-Ate-010310	Aspergillus terreus	33.33	9.00e-51	194.00
IUUC-Ame-011012	Astyanax mexicanus	33.02	6.00e-44	172.00
IUUC-Bgr-012311	Blumeria graminis	34.40	8.00e-38	151.00
IUUC-Bta-013299	Bos taurus	34.36	1.00e-53	203.00
IUUC-Bci-013783	Botrytis cinerea	33.78	2.00e-45	177.00
IUUC-Bdi-015039	Brachypodium distachyon	62.67	4.00e-126	444.00
IUUC-Bol-015806	Brassica oleracea	76.35	0.00e+00	848.00
IUUC-Bra-017877	Brassica rapa	77.47	0.00e+00	834.00
IUUC-Cja-018715	Callithrix jacchus	34.28	6.00e-54	205.00
IUUC-Cfa-020194	Canis familiaris	34.87	6.00e-56	211.00
IUUC-Cpo-022272	Cavia porcellus	35.06	7.00e-56	211.00
IUUC-Cre-022713	Chlamydomonas reinhardtii	30.86	3.00e-35	142.00
IUUC-Csa-023310	Chlorocebus sabaeus	33.76	2.00e-55	210.00
IUUC-Cin-025616	Ciona intestinalis	31.88	7.00e-42	164.00
IUUC-Csv-026043	Ciona savignyi	32.91	4.00e-42	164.00
IUUC-Cgl-026421	Colletotrichum gloeosporioides	30.56	2.00e-37	150.00
IUUC-Cne-026962	Cryptococcus neoformans	29.17	7.00e-37	149.00
IUUC-Cme-027113	Cyanidioschyzon merolae	29.98	2.00e-35	143.00
IUUC-Dre-028072	Danio rerio	32.99	1.00e-55	210.00
IUUC-Dno-029489	Dasypus novemcinctus	35.92	4.00e-56	212.00
IUUC-Dor-031068	Dipodomys ordii	41.73	2.00e-25	110.00
IUUC-Dse-031553	Dothistroma septosporum	32.70	3.00e-46	179.00
IUUC-Dme-031759	Drosophila melanogaster	31.33	4.00e-45	176.00
IUUC-Ete-032549	Echinops telfairi	34.40	7.00e-33	134.00
IUUC-Eca-033380	Equus caballus	35.38	2.00e-56	213.00
IUUC-Eeu-034818	Erinaceus europaeus	35.62	8.00e-53	201.00
IUUC-Fca-035535	Felis catus	34.52	2.00e-49	190.00
IUUC-Fal-036627	Ficedula albicollis	34.18	5.00e-55	208.00
IUUC-Fox-037904	Fusarium oxysporum	34.48	3.00e-47	183.00
IUUC-Fso-038170	Fusarium solani	32.86	8.00e-42	165.00
IUUC-Gmo-039499	Gadus morhua	33.25	1.00e-49	191.00
IUUC-Ggr-040042	Gaeumannomyces graminis	35.16	3.00e-52	199.00
IUUC-Gga-040571	Gallus gallus	33.50	3.00e-52	199.00
IUUC-Gac-041345	Gasterosteus aculeatus	33.68	8.00e-51	194.00
IUUC-Gma-043436	Glycine max	56.32	1.00e-158	552.00
IUUC-Ggo-044652	Gorilla gorilla	35.38	8.00e-56	211.00
IUUC-Hsa-045864	Homo sapiens	35.38	8.00e-56	211.00
IUUC-Hvu-047071	Hordeum vulgare	62.60	3.00e-128	451.00
IUUC-Itr-048216	Ictidomys tridecemlineatus	35.38	7.00e-55	207.00
IUUC-Kpa-049132	Komagataella pastoris	27.96	2.00e-39	155.00
IUUC-Lch-050040	Latimeria chalumnae	33.08	3.00e-53	202.00
IUUC-Lpe-050772	Leersia perrieri	50.22	2.00e-47	182.00
IUUC-Loc-052449	Lepisosteus oculatus	32.58	2.00e-54	206.00
IUUC-Lma-053248	Leptosphaeria maculans	33.52	1.00e-50	194.00
IUUC-Laf-054121	Loxodonta africana	33.59	3.00e-53	202.00
IUUC-Mcc-055514	Macaca mulatta	33.76	2.00e-55	209.00
IUUC-Meu-056873	Macropus eugenii	31.62	4.00e-25	109.00
IUUC-Mor-057243	Magnaporthe oryzae	34.33	8.00e-51	195.00
IUUC-Mpo-057439	Magnaporthe poae	33.78	2.00e-50	194.00
IUUC-Mtr-058457	Medicago truncatula	54.76	2.00e-150	525.00
IUUC-Mla-058929	Melampsora laricipopulina	32.11	8.00e-40	157.00
IUUC-Mga-060157	Meleagris gallopavo	33.42	6.00e-51	195.00
IUUC-Mvi-060442	Microbotryum violaceum	32.65	9.00e-44	172.00
IUUC-Mmr-061062	Microcebus murinus	33.76	7.00e-55	208.00
IUUC-Mdo-062798	Monodelphis domestica	34.19	1.00e-50	194.00
IUUC-Mmu-064050	Mus musculus	35.71	1.00e-59	224.00
IUUC-Mac-065619	Musa acuminata	69.27	3.00e-138	484.00
IUUC-Mpu-066554	Mustela putorius furo	34.10	6.00e-56	211.00
IUUC-Mlu-068003	Myotis lucifugus	33.85	1.00e-55	210.00
IUUC-Nfi-068612	Neosartorya fischeri	34.33	4.00e-52	199.00
IUUC-Ncr-068878	Neurospora crassa	34.65	2.00e-46	181.00
IUUC-Nle-069661	Nomascus leucogenys	35.38	7.00e-56	211.00
IUUC-Opr-070944	Ochotona princeps	35.34	9.00e-35	141.00
IUUC-Ont-071266	Oreochromis niloticus	33.93	4.00e-53	202.00
IUUC-Oan-073442	Ornithorhynchus anatinus	34.78	2.00e-57	216.00
IUUC-Ocu-073788	Oryctolagus cuniculus	34.15	2.00e-50	193.00
IUUC-Oba-075085	Oryza barthii	65.58	1.00e-96	344.00
IUUC-Obr-076663	Oryza brachyantha	62.05	5.00e-115	407.00
IUUC-Ogl-076937	Oryza glaberrima	47.01	3.00e-125	441.00
IUUC-Ogu-078909	Oryza glumaepatula	47.92	6.00e-124	437.00
IUUC-Oin-079617	Oryza indica	46.70	1.00e-118	419.00
IUUC-Olo-081043	Oryza longistaminata	56.02	9.00e-60	224.00
IUUC-Ome-081646	Oryza meridionalis	52.76	2.00e-60	226.00
IUUC-Oni-082914	Oryza nivara	47.92	4.00e-124	437.00
IUUC-Opu-083987	Oryza punctata	67.06	7.00e-26	110.00
IUUC-Oru-084878	Oryza rufipogon	47.92	2.00e-124	439.00
IUUC-Osa-085822	Oryza sativa	61.54	4.00e-125	440.00
IUUC-Ola-086931	Oryzias latipes	33.08	8.00e-50	191.00
IUUC-Oga-088443	Otolemur garnettii	34.36	7.00e-55	208.00
IUUC-Oar-089325	Ovis aries	34.10	7.00e-53	201.00
IUUC-Ptr-091584	Pan troglodytes	33.77	7.00e-50	191.00
IUUC-Pan-092551	Papio anubis	32.74	5.00e-50	191.00
IUUC-Psi-093366	Pelodiscus sinensis	34.53	4.00e-28	119.00
IUUC-Pno-095136	Phaeosphaeria nodorum	32.22	1.00e-42	167.00
IUUC-Ppa-095574	Physcomitrella patens	41.72	5.00e-107	380.00
IUUC-Pfo-097462	Poecilia formosa	33.67	2.00e-51	197.00
IUUC-Pab-098547	Pongo abelii	35.38	5.00e-56	211.00
IUUC-Pop-099529	Populus trichocarpa	57.45	1.00e-166	578.00
IUUC-Pca-101066	Procavia capensis	36.43	3.00e-40	159.00
IUUC-Ppe-102110	Prunus persica	70.44	6.00e-150	523.00
IUUC-Pva-103015	Pteropus vampyrus	35.38	3.00e-56	212.00
IUUC-Ptt-103998	Puccinia triticina	31.70	3.00e-41	162.00
IUUC-Pte-104417	Pyrenophora teres	33.52	8.00e-49	188.00
IUUC-Pyt-104820	Pyrenophora triticirepentis	33.52	1.00e-48	187.00
IUUC-Rno-105533	Rattus norvegicus	35.97	8.00e-61	228.00
IUUC-Sce-106160	Saccharomyces cerevisiae	24.68	8.00e-28	118.00
IUUC-Sha-106590	Sarcophilus harrisii	34.19	1.00e-50	194.00
IUUC-Sja-107669	Schizosaccharomyces japonicus	32.56	3.00e-44	172.00
IUUC-Spo-108353	Schizosaccharomyces pombe	31.42	4.00e-45	174.00
IUUC-Ssl-108599	Sclerotinia sclerotiorum	33.24	4.00e-46	179.00
IUUC-Smo-109645	Selaginella moellendorffii	43.80	1.00e-52	198.00
IUUC-Sit-110781	Setaria italica	49.38	5.00e-135	474.00
IUUC-Sly-111797	Solanum lycopersicum	49.29	4.00e-130	457.00
IUUC-Stu-112188	Solanum tuberosum	52.42	8.00e-142	496.00
IUUC-Sbi-114862	Sorghum bicolor	44.79	1.00e-101	362.00
IUUC-Sre-115162	Sporisorium reilianum	30.52	2.00e-39	156.00
IUUC-Ssc-115505	Sus scrofa	35.28	2.00e-43	168.00
IUUC-Tgu-116535	Taeniopygia guttata	34.43	2.00e-55	209.00
IUUC-Tru-117542	Takifugu rubripes	33.67	2.00e-56	213.00
IUUC-Tni-120200	Tetraodon nigroviridis	33.67	1.00e-55	210.00
IUUC-Tca-121548	Theobroma cacao	53.59	1.00e-135	476.00
IUUC-Tre-122124	Trichoderma reesei	33.69	3.00e-49	189.00
IUUC-Tvi-122457	Trichoderma virens	31.97	9.00e-43	168.00
IUUC-Tae-125646	Triticum aestivum	62.78	8.00e-130	457.00
IUUC-Tme-127180	Tuber melanosporum	34.62	1.00e-53	204.00
IUUC-Tbe-127530	Tupaia belangeri	35.20	2.00e-36	146.00
IUUC-Ttr-128549	Tursiops truncatus	30.36	2.00e-41	163.00
IUUC-Uma-129381	Ustilago maydis	31.97	9.00e-46	178.00
IUUC-Vda-129889	Verticillium dahliae	34.36	3.00e-45	176.00
IUUC-Vpa-130100	Vicugna pacos	32.81	2.00e-42	166.00
IUUC-Vvi-131366	Vitis vinifera	55.32	1.00e-164	572.00
IUUC-Xtr-132048	Xenopus tropicalis	33.33	3.00e-56	213.00
IUUC-Xma-133593	Xiphophorus maculatus	33.93	5.00e-52	199.00
IUUC-Yli-134338	Yarrowia lipolytica	27.27	4.00e-28	119.00
IUUC-Zma-135586	Zea mays	62.43	3.00e-128	451.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence