iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017011

Ensembl Protein ID

Bra006916.1-P

UniProt Accession

M4CRS4; M4CRS4_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra006916	Bra006916.1	Bra006916.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.00e-08	34.4	307	350

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl d++d+  +  lp C+H+fh +C++ w     + +++ +CPlCr
   Q: 307  CSICLMDYEDEdaVTQLPrCNHLFHVHCIEPW-----LLRGSLTCPLCR 350
           ********77644444557*************.....89*********8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MEEFGAKKNE NQALETDFAE RPMWLMKCPS LIASALQSLP STDDSYLPVA KVILSFDPLA 60
AVDEEETKFV MELARAGSGN IPKRFGLDMS KDFIPMSVFS ESSSQGKMSV EGKIKNKFHM 120

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Nucleotide Sequence
(Fasta)

ATGGAAGAGT TTGGGGCAAA GAAGAATGAG AATCAAGCTT TGGAAACAGA TTTTGCAGAG 60
AGACCAATGT GGCTGATGAA ATGCCCTTCT CTCATCGCTT CTGCTCTCCA ATCTCTTCCT 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR003196--TFIIF_beta
IPR011039--TFIIF_interaction
IPR011991--WHTH_DNA-bd_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF02270--TFIIF_beta
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005674--C:transcription factor TFIIF complex
GO:0003824--F:catalytic activity
GO:0008270--F:zinc ion binding
GO:0006367--P:transcription initiation from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-016260	Brassica oleracea	92.97	3.00e-46	176.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence