iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111434

Ensembl Protein ID

Solyc01g100100.2.1

UniProt Accession

K4B144; K4B144_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc01g100100.2	Solyc01g100100.2.1	Solyc01g100100.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.80e-07	30.1	84	127

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl ++  +d ++ lp C+Hvfh +C++ w     +++ +f+CPlCr
   Q: 84   CSICLMEYekDDVVCELPrCKHVFHMECIEGW-----VERCQFTCPLCR 127
           ****999976665887888*************.....899********8 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MISSVVTAQS HISFITITFY TFLYIPFSHI HQFVHKMLEF FYPYPRPVSG AVAVTVPTYC 60
ELSLATTTFA DVCNLGERGV EESCSICLME YEKDDVVCEL PRCKHVFHME CIEGWVERCQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATAAGTT CAGTCGTAAC AGCACAATCT CACATTTCAT TTATTACAAT CACATTCTAC 60
ACATTTTTGT ATATTCCTTT TAGTCATATA CATCAATTCG TTCACAAAAT GTTGGAATTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR019786--Zinc_finger_PHD-type_CS
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006032	Arabidopsis lyrata	57.14	2.00e-13	67.40
IUUC-Bra-017011	Brassica rapa	58.00	2.00e-14	72.40
IUUC-Gma-043261	Glycine max	38.89	2.00e-18	83.60
IUUC-Mor-056980	Magnaporthe oryzae	30.00	8.00e-10	57.80
IUUC-Mtr-058301	Medicago truncatula	49.21	5.00e-13	65.50
IUUC-Pop-099029	Populus trichocarpa	34.45	1.00e-15	74.30
IUUC-Ppe-101276	Prunus persica	37.88	2.00e-22	97.40
IUUC-Stu-112341	Solanum tuberosum	89.78	3.00e-70	256.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence