iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-001158

Ensembl Protein ID

EMT23478

UniProt Accession

M8BNS6; M8BNS6_AEGTA

Genbank Protein ID

EMT23478.1

Protein Name

Ribosome biogenesis protein BOP1 homolog

Genbank Nucleotide ID

KD520006

Gene Name

F775_26837

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_26837	EMT23478	EMT23478

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.80e-11	43.2	385	423

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH ++vt+l+   ++  ++sGs Dgti+vW++ tg++lk
   Q: 385  GHGGPVTSLSVeaTGQWIASGSSDGTIRVWEVETGRCLK 423
           8*********9976699********************97 PP

Organism

Aegilops tauschii

Functional Description
(View)

Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit.

Protein Sequence
(Fasta)

MGRADGEDKA ALSPGGEDTA DLSPDDSPWS DSAWSEDDDD AEAPPRSPPH PSDFLLSADG 60
LSMLPPQASL SFEDSGEGSG SDADSDGLEE EDDAAAEESD SSEDEVAPRN TVGNVPLQWY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGCGCG CCGATGGAGA AGACAAGGCC GCGCTCTCCC CCGGCGGGGA GGACACCGCC 60
GACCTCTCCC CCGACGACTC GCCGTGGAGC GACAGCGCCT GGTCCGAGGA CGACGACGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0539--Nucleus
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0030687--C:preribosome, large subunit precursor
GO:0043021--F:ribonucleoprotein complex binding
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

ats:F775_26837

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001507	Ailuropoda melanoleuca	39.17	2.00e-109	389.00
IUUC-Atr-003141	Amborella trichopoda	62.01	5.00e-148	516.00
IUUC-Apl-003545	Anas platyrhynchos	41.81	2.00e-117	415.00
IUUC-Aly-005649	Arabidopsis lyrata	60.41	0.00e+00	733.00
IUUC-Ath-007625	Arabidopsis thaliana	60.65	0.00e+00	713.00
IUUC-Ago-007958	Ashbya gossypii	37.04	5.00e-114	404.00
IUUC-Acl-008344	Aspergillus clavatus	41.59	3.00e-64	239.00
IUUC-Afl-008616	Aspergillus flavus	37.84	3.00e-101	362.00
IUUC-Afu-009083	Aspergillus fumigatus	42.48	1.00e-61	230.00
IUUC-Ani-009365	Aspergillus nidulans	40.62	3.00e-69	256.00
IUUC-Ang-009796	Aspergillus niger	37.90	8.00e-100	357.00
IUUC-Aor-010015	Aspergillus oryzae	37.84	2.00e-101	362.00
IUUC-Ate-010537	Aspergillus terreus	38.13	8.00e-105	374.00
IUUC-Ame-011767	Astyanax mexicanus	47.47	9.00e-48	182.00
IUUC-Bgr-012286	Blumeria graminis	39.90	9.00e-115	407.00
IUUC-Bta-013569	Bos taurus	41.46	9.00e-123	433.00
IUUC-Bci-013820	Botrytis cinerea	39.14	8.00e-104	370.00
IUUC-Bdi-014895	Brachypodium distachyon	84.01	0.00e+00	991.00
IUUC-Bol-016099	Brassica oleracea	61.07	0.00e+00	748.00
IUUC-Bra-017174	Brassica rapa	60.97	0.00e+00	755.00
IUUC-Cel-018201	Caenorhabditis elegans	37.86	2.00e-107	382.00
IUUC-Cja-019009	Callithrix jacchus	38.85	3.00e-114	405.00
IUUC-Cfa-020173	Canis familiaris	38.35	1.00e-111	397.00
IUUC-Cpo-021796	Cavia porcellus	40.92	1.00e-122	433.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	46.55	2.00e-136	478.00
IUUC-Csa-023440	Chlorocebus sabaeus	40.89	2.00e-126	445.00
IUUC-Cin-025782	Ciona intestinalis	40.06	2.00e-118	419.00
IUUC-Csv-026352	Ciona savignyi	42.16	1.00e-129	456.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	35.68	7.00e-90	324.00
IUUC-Cne-027004	Cryptococcus neoformans	40.54	3.00e-126	445.00
IUUC-Cme-027242	Cyanidioschyzon merolae	32.13	4.00e-86	311.00
IUUC-Dre-028658	Danio rerio	43.73	6.00e-134	470.00
IUUC-Dno-028883	Dasypus novemcinctus	41.81	9.00e-126	443.00
IUUC-Dor-031031	Dipodomys ordii	40.27	1.00e-122	432.00
IUUC-Dse-031443	Dothistroma septosporum	36.28	1.00e-102	366.00
IUUC-Dme-031786	Drosophila melanogaster	39.24	7.00e-124	437.00
IUUC-Eca-033677	Equus caballus	41.29	2.00e-124	439.00
IUUC-Eeu-035310	Erinaceus europaeus	37.43	5.00e-97	347.00
IUUC-Fca-035888	Felis catus	40.56	3.00e-122	431.00
IUUC-Fal-037438	Ficedula albicollis	42.22	6.00e-106	377.00
IUUC-Fox-037973	Fusarium oxysporum	39.02	9.00e-119	420.00
IUUC-Fso-038187	Fusarium solani	38.85	5.00e-117	414.00
IUUC-Gmo-039114	Gadus morhua	39.08	1.00e-114	406.00
IUUC-Ggr-039746	Gaeumannomyces graminis	39.02	2.00e-119	422.00
IUUC-Gga-040631	Gallus gallus	42.54	1.00e-66	246.00
IUUC-Gac-042582	Gasterosteus aculeatus	40.07	4.00e-118	418.00
IUUC-Gma-044215	Glycine max	59.73	0.00e+00	707.00
IUUC-Ggo-045587	Gorilla gorilla	41.06	7.00e-127	446.00
IUUC-Hsa-046319	Homo sapiens	41.16	7.00e-127	447.00
IUUC-Hvu-047526	Hordeum vulgare	84.47	0.00e+00	1068.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	40.92	3.00e-124	438.00
IUUC-Kpa-049221	Komagataella pastoris	37.66	4.00e-110	391.00
IUUC-Lch-049640	Latimeria chalumnae	41.82	3.00e-136	478.00
IUUC-Lpe-051135	Leersia perrieri	83.13	0.00e+00	917.00
IUUC-Loc-051930	Lepisosteus oculatus	43.17	1.00e-137	482.00
IUUC-Lma-053290	Leptosphaeria maculans	37.30	2.00e-99	356.00
IUUC-Laf-053903	Loxodonta africana	45.13	1.00e-81	296.00
IUUC-Mcc-055471	Macaca mulatta	40.56	1.00e-125	442.00
IUUC-Meu-056190	Macropus eugenii	41.49	3.00e-124	438.00
IUUC-Mor-057135	Magnaporthe oryzae	38.24	5.00e-110	391.00
IUUC-Mpo-057475	Magnaporthe poae	38.21	6.00e-112	397.00
IUUC-Mtr-058689	Medicago truncatula	61.76	1.00e-136	479.00
IUUC-Mla-059149	Melampsora laricipopulina	39.77	1.00e-119	423.00
IUUC-Mga-059645	Meleagris gallopavo	37.40	3.00e-42	164.00
IUUC-Mvi-060485	Microbotryum violaceum	39.71	6.00e-108	385.00
IUUC-Mmr-061674	Microcebus murinus	40.67	5.00e-121	427.00
IUUC-Mdo-062973	Monodelphis domestica	41.19	2.00e-128	452.00
IUUC-Mmu-064180	Mus musculus	40.70	1.00e-123	436.00
IUUC-Mac-064535	Musa acuminata	72.52	5.00e-180	624.00
IUUC-Mpu-066406	Mustela putorius furo	41.72	3.00e-128	451.00
IUUC-Mlu-067795	Myotis lucifugus	41.60	4.00e-118	417.00
IUUC-Nfi-068516	Neosartorya fischeri	41.89	1.00e-54	207.00
IUUC-Ncr-068767	Neurospora crassa	38.42	6.00e-102	364.00
IUUC-Opr-071084	Ochotona princeps	43.94	1.00e-60	226.00
IUUC-Ont-071614	Oreochromis niloticus	40.50	6.00e-129	454.00
IUUC-Oba-075980	Oryza barthii	82.67	0.00e+00	922.00
IUUC-Obr-076799	Oryza brachyantha	73.18	0.00e+00	940.00
IUUC-Ogl-077134	Oryza glaberrima	78.10	0.00e+00	920.00
IUUC-Ogu-078655	Oryza glumaepatula	80.36	0.00e+00	914.00
IUUC-Oin-079654	Oryza indica	78.58	0.00e+00	915.00
IUUC-Olo-080706	Oryza longistaminata	82.83	0.00e+00	927.00
IUUC-Ome-081716	Oryza meridionalis	76.33	0.00e+00	853.00
IUUC-Oni-082508	Oryza nivara	75.28	0.00e+00	868.00
IUUC-Opu-083707	Oryza punctata	83.30	0.00e+00	918.00
IUUC-Oru-084453	Oryza rufipogon	82.83	0.00e+00	927.00
IUUC-Osa-085811	Oryza sativa	78.10	0.00e+00	920.00
IUUC-Ola-087361	Oryzias latipes	43.00	2.00e-132	466.00
IUUC-Oga-088015	Otolemur garnettii	40.56	1.00e-127	449.00
IUUC-Oar-090058	Ovis aries	38.56	6.00e-59	221.00
IUUC-Ptr-090631	Pan troglodytes	42.75	1.00e-55	209.00
IUUC-Pan-092306	Papio anubis	40.99	1.00e-125	443.00
IUUC-Pma-094622	Petromyzon marinus	42.45	2.00e-133	468.00
IUUC-Pno-094794	Phaeosphaeria nodorum	34.70	1.00e-91	330.00
IUUC-Ppa-095528	Physcomitrella patens	54.61	8.00e-140	489.00
IUUC-Pfo-096682	Poecilia formosa	42.04	6.00e-132	464.00
IUUC-Pab-097939	Pongo abelii	40.18	8.00e-112	397.00
IUUC-Pop-099043	Populus trichocarpa	64.89	0.00e+00	697.00
IUUC-Pca-100333	Procavia capensis	41.26	9.00e-126	443.00
IUUC-Ppe-102078	Prunus persica	59.03	0.00e+00	687.00
IUUC-Pgr-103525	Puccinia graminis	40.00	6.00e-111	394.00
IUUC-Ptt-103929	Puccinia triticina	40.00	3.00e-110	392.00
IUUC-Pte-104029	Pyrenophora teres	37.85	4.00e-111	395.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	37.22	4.00e-111	395.00
IUUC-Rno-105248	Rattus norvegicus	41.53	5.00e-125	441.00
IUUC-Sce-106381	Saccharomyces cerevisiae	41.46	1.00e-74	273.00
IUUC-Sha-106519	Sarcophilus harrisii	42.88	4.00e-131	461.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	38.81	3.00e-108	385.00
IUUC-Spo-108071	Schizosaccharomyces pombe	37.66	7.00e-106	377.00
IUUC-Smo-109604	Selaginella moellendorffii	55.61	0.00e+00	647.00
IUUC-Sit-110551	Setaria italica	79.12	0.00e+00	937.00
IUUC-Sly-110970	Solanum lycopersicum	71.76	9.00e-149	519.00
IUUC-Stu-112593	Solanum tuberosum	64.03	0.00e+00	769.00
IUUC-Sar-113123	Sorex araneus	35.22	3.00e-41	161.00
IUUC-Sbi-113945	Sorghum bicolor	78.52	0.00e+00	938.00
IUUC-Sre-115188	Sporisorium reilianum	42.66	1.00e-76	280.00
IUUC-Ssc-115352	Sus scrofa	41.74	1.00e-127	449.00
IUUC-Tru-117685	Takifugu rubripes	43.27	4.00e-132	464.00
IUUC-Tni-119982	Tetraodon nigroviridis	42.47	5.00e-132	464.00
IUUC-Tca-121664	Theobroma cacao	62.58	0.00e+00	761.00
IUUC-Tre-122229	Trichoderma reesei	39.22	7.00e-102	363.00
IUUC-Tvi-122576	Trichoderma virens	39.44	7.00e-105	374.00
IUUC-Tae-125772	Triticum aestivum	92.43	0.00e+00	1107.00
IUUC-Tur-126781	Triticum urartu	98.01	0.00e+00	1151.00
IUUC-Tme-127080	Tuber melanosporum	41.14	6.00e-128	450.00
IUUC-Ttr-128514	Tursiops truncatus	46.27	2.00e-86	313.00
IUUC-Uma-129556	Ustilago maydis	42.38	9.00e-74	271.00
IUUC-Vda-129715	Verticillium dahliae	39.28	8.00e-112	397.00
IUUC-Vvi-131211	Vitis vinifera	62.04	0.00e+00	775.00
IUUC-Xma-133883	Xiphophorus maculatus	41.15	8.00e-129	453.00
IUUC-Yli-134438	Yarrowia lipolytica	38.55	1.00e-105	377.00
IUUC-Zma-135341	Zea mays	80.15	0.00e+00	660.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence