iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Csa-023440

Ensembl Protein ID

ENSCSAP00000004913.1

UniProt Accession

A0A0D9R8H4; A0A0D9R8H4_CHLSB

Genbank Protein ID

ENSCSAP00000004913

Protein Name

Ribosome biogenesis protein BOP1; Block of proliferation 1 protein

Genbank Nucleotide ID

AQIB01115374

Gene Name

BOP1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCSAG00000008653.1	ENSCSAT00000006715.1	ENSCSAP00000004913.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-14	54.0	410	449

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH+d v+cl+  ++   lvsGsdDg+++ W++ t +++++
   Q: 410  GHSDLVRCLSVsPGgQWLVSGSDDGSLRFWEVATARCVRT 449
           8**********988899********************985 PP

Organism

Chlorocebus sabaeus

Functional Description
(View)

Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.

Protein Sequence
(Fasta)

MAGSRGAGRT AAPSVRPEKR RSEPELEPEP EPEPPLLCTS PLSHSTGSDS GVSDSEESVF 60
SGLEDSGSDS SEDDDEGDEG EDGALSDESH SGMEKTTEEQ VQDGSPGPRT EVASARIGDE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGCGGGACA TGGCGGGTTC GCGGGGCGCG GGGCGCACGG CGGCGCCGAG CGTGCGGCCG 60
GAGAAGCGGC GGTCGGAGCC CGAACTGGAG CCTGAGCCCG AGCCAGAGGT GACTGCGGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0070545--C:PeBoW complex
GO:0030687--C:preribosome, large subunit precursor
GO:0043021--F:ribonucleoprotein complex binding
GO:0003723--F:RNA binding
GO:0008283--P:cell proliferation
GO:0000448--P:cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0051726--P:regulation of cell cycle

KEGG

csab:103237616

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	40.89	7.00e-123	434.00
IUUC-Aml-001507	Ailuropoda melanoleuca	86.06	0.00e+00	1097.00
IUUC-Atr-003141	Amborella trichopoda	41.72	7.00e-88	317.00
IUUC-Apl-003545	Anas platyrhynchos	68.06	0.00e+00	808.00
IUUC-Aly-005649	Arabidopsis lyrata	43.90	1.00e-153	537.00
IUUC-Ath-007625	Arabidopsis thaliana	41.93	3.00e-151	528.00
IUUC-Ago-007958	Ashbya gossypii	41.82	1.00e-160	560.00
IUUC-Acl-008344	Aspergillus clavatus	43.87	2.00e-144	506.00
IUUC-Afl-008616	Aspergillus flavus	42.11	4.00e-148	518.00
IUUC-Afu-009083	Aspergillus fumigatus	45.14	5.00e-143	501.00
IUUC-Ani-009365	Aspergillus nidulans	43.58	5.00e-147	514.00
IUUC-Ang-009796	Aspergillus niger	43.73	2.00e-142	499.00
IUUC-Aor-010015	Aspergillus oryzae	42.11	4.00e-148	518.00
IUUC-Ate-010537	Aspergillus terreus	43.95	6.00e-150	524.00
IUUC-Ame-011767	Astyanax mexicanus	69.55	5.00e-113	400.00
IUUC-Bgr-012286	Blumeria graminis	42.99	1.00e-150	526.00
IUUC-Bta-013569	Bos taurus	89.74	0.00e+00	1123.00
IUUC-Bci-013820	Botrytis cinerea	41.72	9.00e-144	504.00
IUUC-Bdi-014895	Brachypodium distachyon	46.07	1.00e-155	543.00
IUUC-Bol-016099	Brassica oleracea	44.08	4.00e-154	538.00
IUUC-Bra-017174	Brassica rapa	43.92	3.00e-154	539.00
IUUC-Cel-018201	Caenorhabditis elegans	46.39	2.00e-155	542.00
IUUC-Cja-019009	Callithrix jacchus	79.91	0.00e+00	1008.00
IUUC-Cfa-020173	Canis familiaris	83.74	0.00e+00	1060.00
IUUC-Cpo-021796	Cavia porcellus	89.07	0.00e+00	1118.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	48.12	1.00e-156	546.00
IUUC-Cin-025782	Ciona intestinalis	54.91	0.00e+00	742.00
IUUC-Csv-026352	Ciona savignyi	55.33	0.00e+00	741.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	39.10	3.00e-117	416.00
IUUC-Cne-027004	Cryptococcus neoformans	44.68	5.00e-169	588.00
IUUC-Cme-027242	Cyanidioschyzon merolae	38.94	3.00e-121	429.00
IUUC-Dre-028658	Danio rerio	74.04	0.00e+00	1002.00
IUUC-Dno-028883	Dasypus novemcinctus	84.17	0.00e+00	1124.00
IUUC-Dor-031031	Dipodomys ordii	88.38	0.00e+00	1165.00
IUUC-Dse-031443	Dothistroma septosporum	40.06	2.00e-144	506.00
IUUC-Dme-031786	Drosophila melanogaster	53.68	0.00e+00	738.00
IUUC-Eca-033677	Equus caballus	88.24	0.00e+00	1155.00
IUUC-Eeu-035310	Erinaceus europaeus	88.05	0.00e+00	936.00
IUUC-Fca-035888	Felis catus	88.39	0.00e+00	1122.00
IUUC-Fal-037438	Ficedula albicollis	69.38	0.00e+00	740.00
IUUC-Fox-037973	Fusarium oxysporum	42.56	1.00e-158	553.00
IUUC-Fso-038187	Fusarium solani	41.64	2.00e-157	549.00
IUUC-Gmo-039114	Gadus morhua	65.53	0.00e+00	831.00
IUUC-Ggr-039746	Gaeumannomyces graminis	42.06	8.00e-153	534.00
IUUC-Gga-040631	Gallus gallus	74.04	1.00e-157	548.00
IUUC-Gac-042582	Gasterosteus aculeatus	67.96	0.00e+00	892.00
IUUC-Gma-044215	Glycine max	44.88	8.00e-151	527.00
IUUC-Ggo-045587	Gorilla gorilla	98.22	0.00e+00	1223.00
IUUC-Hsa-046319	Homo sapiens	96.51	0.00e+00	1291.00
IUUC-Hvu-047526	Hordeum vulgare	44.86	1.00e-145	510.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	89.94	0.00e+00	1135.00
IUUC-Kpa-049221	Komagataella pastoris	41.77	1.00e-153	536.00
IUUC-Lch-049640	Latimeria chalumnae	73.52	0.00e+00	1011.00
IUUC-Lpe-051135	Leersia perrieri	42.33	1.00e-133	469.00
IUUC-Loc-051930	Lepisosteus oculatus	73.05	0.00e+00	984.00
IUUC-Lma-053290	Leptosphaeria maculans	43.26	1.00e-143	503.00
IUUC-Laf-053903	Loxodonta africana	77.95	0.00e+00	1016.00
IUUC-Mcc-055471	Macaca mulatta	97.45	0.00e+00	1307.00
IUUC-Meu-056190	Macropus eugenii	84.58	0.00e+00	1053.00
IUUC-Mor-057135	Magnaporthe oryzae	41.42	3.00e-145	508.00
IUUC-Mpo-057475	Magnaporthe poae	40.43	3.00e-141	496.00
IUUC-Mtr-058689	Medicago truncatula	40.71	5.00e-133	468.00
IUUC-Mla-059149	Melampsora laricipopulina	45.14	2.00e-168	586.00
IUUC-Mga-059645	Meleagris gallopavo	65.16	9.00e-99	352.00
IUUC-Mvi-060485	Microbotryum violaceum	44.97	2.00e-148	520.00
IUUC-Mmr-061674	Microcebus murinus	83.33	0.00e+00	1121.00
IUUC-Mdo-062973	Monodelphis domestica	84.07	0.00e+00	1076.00
IUUC-Mmu-064180	Mus musculus	87.25	0.00e+00	1129.00
IUUC-Mac-064535	Musa acuminata	41.27	9.00e-96	344.00
IUUC-Mpu-066406	Mustela putorius furo	90.76	0.00e+00	1168.00
IUUC-Mlu-067795	Myotis lucifugus	89.89	0.00e+00	1114.00
IUUC-Nfi-068516	Neosartorya fischeri	44.97	1.00e-136	480.00
IUUC-Ncr-068767	Neurospora crassa	42.90	1.00e-139	490.00
IUUC-Opr-071084	Ochotona princeps	87.14	9.00e-144	503.00
IUUC-Ont-071614	Oreochromis niloticus	69.14	0.00e+00	919.00
IUUC-Oba-075980	Oryza barthii	42.23	2.00e-133	469.00
IUUC-Obr-076799	Oryza brachyantha	44.75	2.00e-147	516.00
IUUC-Ogl-077134	Oryza glaberrima	44.21	2.00e-142	499.00
IUUC-Ogu-078655	Oryza glumaepatula	42.60	2.00e-137	482.00
IUUC-Oin-079654	Oryza indica	44.21	7.00e-142	497.00
IUUC-Olo-080706	Oryza longistaminata	42.16	2.00e-134	473.00
IUUC-Ome-081716	Oryza meridionalis	38.35	2.00e-114	406.00
IUUC-Oni-082508	Oryza nivara	42.70	6.00e-134	471.00
IUUC-Opu-083707	Oryza punctata	42.16	1.00e-133	470.00
IUUC-Oru-084453	Oryza rufipogon	42.16	2.00e-134	473.00
IUUC-Osa-085811	Oryza sativa	44.21	3.00e-142	499.00
IUUC-Ola-087361	Oryzias latipes	69.53	0.00e+00	941.00
IUUC-Oga-088015	Otolemur garnettii	86.58	0.00e+00	1174.00
IUUC-Oar-090058	Ovis aries	92.26	3.00e-89	322.00
IUUC-Ptr-090631	Pan troglodytes	96.75	4.00e-150	524.00
IUUC-Pan-092306	Papio anubis	97.85	0.00e+00	1340.00
IUUC-Pma-094622	Petromyzon marinus	72.12	0.00e+00	971.00
IUUC-Pno-094794	Phaeosphaeria nodorum	39.07	2.00e-130	459.00
IUUC-Ppa-095528	Physcomitrella patens	42.86	1.00e-95	343.00
IUUC-Pfo-096682	Poecilia formosa	70.36	0.00e+00	953.00
IUUC-Pab-097939	Pongo abelii	97.51	0.00e+00	1100.00
IUUC-Pop-099530	Populus trichocarpa	44.73	4.00e-137	481.00
IUUC-Pca-100333	Procavia capensis	83.24	0.00e+00	1133.00
IUUC-Ppe-102078	Prunus persica	43.32	5.00e-148	518.00
IUUC-Pgr-103525	Puccinia graminis	46.01	2.00e-162	566.00
IUUC-Ptt-103929	Puccinia triticina	45.61	1.00e-157	550.00
IUUC-Pte-104029	Pyrenophora teres	42.64	7.00e-152	531.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	42.79	5.00e-152	531.00
IUUC-Rno-105248	Rattus norvegicus	88.50	0.00e+00	1133.00
IUUC-Sce-106381	Saccharomyces cerevisiae	40.47	5.00e-155	541.00
IUUC-Sha-106519	Sarcophilus harrisii	84.11	0.00e+00	1083.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	42.02	3.00e-141	495.00
IUUC-Spo-108071	Schizosaccharomyces pombe	42.66	4.00e-142	498.00
IUUC-Smo-109604	Selaginella moellendorffii	46.64	1.00e-156	546.00
IUUC-Sit-110551	Setaria italica	44.46	8.00e-147	514.00
IUUC-Sly-110970	Solanum lycopersicum	46.11	9.00e-81	294.00
IUUC-Stu-112593	Solanum tuberosum	44.61	2.00e-151	529.00
IUUC-Sar-113123	Sorex araneus	84.44	1.00e-146	512.00
IUUC-Sbi-113945	Sorghum bicolor	43.82	3.00e-149	521.00
IUUC-Sre-115188	Sporisorium reilianum	44.77	1.00e-162	567.00
IUUC-Ssc-115352	Sus scrofa	91.25	0.00e+00	1108.00
IUUC-Tru-117685	Takifugu rubripes	69.92	0.00e+00	944.00
IUUC-Tni-119982	Tetraodon nigroviridis	69.89	0.00e+00	893.00
IUUC-Tca-121664	Theobroma cacao	45.00	2.00e-156	546.00
IUUC-Tre-122229	Trichoderma reesei	42.96	2.00e-140	493.00
IUUC-Tvi-122576	Trichoderma virens	43.20	1.00e-144	506.00
IUUC-Tae-124110	Triticum aestivum	44.44	4.00e-136	478.00
IUUC-Tur-126781	Triticum urartu	41.72	6.00e-119	421.00
IUUC-Tme-127080	Tuber melanosporum	47.24	3.00e-174	605.00
IUUC-Ttr-128514	Tursiops truncatus	87.39	0.00e+00	811.00
IUUC-Uma-129556	Ustilago maydis	43.22	5.00e-154	538.00
IUUC-Vda-129715	Verticillium dahliae	43.05	1.00e-152	533.00
IUUC-Vvi-131211	Vitis vinifera	44.44	8.00e-148	517.00
IUUC-Xma-133883	Xiphophorus maculatus	70.16	0.00e+00	920.00
IUUC-Yli-134438	Yarrowia lipolytica	43.03	4.00e-143	502.00
IUUC-Zma-135341	Zea mays	39.56	8.00e-135	474.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence